Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3952 |
Symbol | |
ID | 8255086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4753073 |
End bp | 4754347 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937616 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_003094205 |
Protein GI | 255533833 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.273153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCAG CAAATAAGCC ACATATTGCA ATTATCGGAT TAGGCTATGT AGGGCTACCC CTGGCCATTG AATTTGCCAA ACAGTACCAG GTATTGGGCT TTGATATTGA TGAAGAAAGA ATAAAAGACC TTACTGCAAA CATAGACCGC ACCAAAGAGG CAGACCTGAA CGCACTACAA AATGTACTTG GTAAAGGTCT TACCCTATCC TCCAATCAAT CCTTATTAGA AGACTGCAAT GTTTACATCG TAACGGTACC TACCCCTATT GATCAGTTTA AGGCGCCCGA CTTAAAACCC TTGCTTAGTG CTTCTAAAAT GCTGGCAAAG TACCTGTTAA AAGGAGATGT GGTCATTTAT GAATCTACCG TTTACCCGGG CTGTACCGAA GAGGATTGCG TACCCATCCT GGAAAAACAC TCCGGTTTAA AATACAATAG CGATTTTTAT TGCGGCTATT CCCCGGAAAG GATCAACCCT GGCGACAAAG TAAACACGCT TACCAAAATC ATCAAGGTTA CTTCTGGTTC TACTCCCGAA GTGGCCGACT GGATTGACGG ACTATACGCC AGCATCATTA CCGCAGGTAC CCACAAAGCC CCAAGCATAA AAGTTGCTGA GGCCTCAAAA GCCATAGAAA ATGCCCAGCG GGATGTAAAT ATCTCCTTTG TGAACGAACT GGCACTTATA TTCGATAAGC TGGATATTGA TACTGCAGAC GTGATTGCAG CTGCAGGAAC AAAATGGAAT TTCCTGAAAT ATAAGCCTGG CCTGGTGGGT GGGCACTGCA TTGGGGTCGA TCCCTATTAC CTGGCACATA AATCCAATGC ACTTGGTTAC ACCCCTCAGG TCATCCTGTC GGGCAGAAGG GTGAACGAAA ACATGGGTAT TTTTGTGGCC AGTAAGGTGG TTAAAATGAT GATTGCCAAA GGATCTGCTG TAAAAGGAGA AAAAGCCCTC ATTCTGGGTT TCGCATTTAA AGAAAACTGT CCGGACATCA GGAACACCAG GGTTATCGAT ATTTATACAG AGTTGCAGCA ATTTGGTATG GAAGTAGATG TTTATGATCC ATGGGCAAAT GCAGATGAAG TAGCGCAGGA ATATAACATT ACATTAAGCC CAGACCTGGC AAACCAGGAA TATAAAGCAA TCATCATTGC CGTTGCCCAT AATGAGTTTT TGAGCATCGA TTACCAGAAA TACAAACAAG CGGGCGCAAT CATTTTTGAT ACCAAATCAT TTATCGACCG CAAGTTTGCA GATGCAAGAT TGTAA
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Protein sequence | MSAANKPHIA IIGLGYVGLP LAIEFAKQYQ VLGFDIDEER IKDLTANIDR TKEADLNALQ NVLGKGLTLS SNQSLLEDCN VYIVTVPTPI DQFKAPDLKP LLSASKMLAK YLLKGDVVIY ESTVYPGCTE EDCVPILEKH SGLKYNSDFY CGYSPERINP GDKVNTLTKI IKVTSGSTPE VADWIDGLYA SIITAGTHKA PSIKVAEASK AIENAQRDVN ISFVNELALI FDKLDIDTAD VIAAAGTKWN FLKYKPGLVG GHCIGVDPYY LAHKSNALGY TPQVILSGRR VNENMGIFVA SKVVKMMIAK GSAVKGEKAL ILGFAFKENC PDIRNTRVID IYTELQQFGM EVDVYDPWAN ADEVAQEYNI TLSPDLANQE YKAIIIAVAH NEFLSIDYQK YKQAGAIIFD TKSFIDRKFA DARL
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