Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3924 |
Symbol | |
ID | 8255058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4723261 |
End bp | 4724250 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937588 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003094177 |
Protein GI | 255533805 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.228757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0226045 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA AAAGAGTTTT AATTACCGGT GCTGCCGGCT TTTTAGGTTC GCATTTATGC GACAGATTTA TCAAAGAGGG TTATCATGTG ATCGCAATGG ACAACCTGAT TACGGGCGAC CTGCAAAACA TACAGCATTT ATTCGGATTG GAAAATTTTG AGTTTGCACA TCACGATGTT TCCAAATATG TATATGTATC TGGCGAGCTG GATTATATTC TTCATTTTGC TTCACCCGCC AGCCCGATTG ATTATTTAAA AATTCCTATT CAAACCCTCA AAGTTGGCTC ATTGGGCACA CACAACCTGC TTGGTTTGGC GAAAAATAAA AATGCAAGGA TGCTGATCGC TTCTACTTCA GAAGTTTATG GTGACCCAAG TGTAAACCCT CAGCCTGAAG AATACTGGGG CAATGTAAAC CCTGTTGGTC CAAGGGGTGT TTATGATGAA GCAAAACGTT TTCAGGAAGC CATGACCATG GCTTACCATA CTTTTCATGG TTTGGAAACC CGCATTGTAA GGATATTTAA TACTTACGGA CCAAGGATGC GGTTGAATGA CGGACGTGTT TTGCCTGCCT TTATTGGCCA GGCCCTGCGC GGAGAAGACC TGACCGTATT TGGGGATGGC TCGCAGACCC GCTCATTTTG CTATGTGGAT GACCTGATAG AAGGTATTTA CAGGCTATTG CTGAGTGATT ATGCCCTTCC GGTGAACATT GGCAACCCGG ATGAGATCAC CATCAGGCAA TTTGGAGAAG AGATCATCAA ACTTACCGGT ACAAGCCAGA AACTGGTATT GAAAGACCTG CCGGTAGACG ATCCTAAGCA AAGACGGCCT GACATTACCA AGGCAAGAGC GATACTGGGT TGGGAACCGA AAGTAAGCCG TGCCGAAGGG TTAAAAATTA CTTATGAGTA TTTTAAATCC CTGCCCCAGG AAGCTTTAAC AAACAAAGAA CATAAAGATT TTTCTACTTT TAATCTATAA
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Protein sequence | MKTKRVLITG AAGFLGSHLC DRFIKEGYHV IAMDNLITGD LQNIQHLFGL ENFEFAHHDV SKYVYVSGEL DYILHFASPA SPIDYLKIPI QTLKVGSLGT HNLLGLAKNK NARMLIASTS EVYGDPSVNP QPEEYWGNVN PVGPRGVYDE AKRFQEAMTM AYHTFHGLET RIVRIFNTYG PRMRLNDGRV LPAFIGQALR GEDLTVFGDG SQTRSFCYVD DLIEGIYRLL LSDYALPVNI GNPDEITIRQ FGEEIIKLTG TSQKLVLKDL PVDDPKQRRP DITKARAILG WEPKVSRAEG LKITYEYFKS LPQEALTNKE HKDFSTFNL
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