Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3891 |
Symbol | |
ID | 8255025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4682070 |
End bp | 4684478 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937555 |
Product | capsular exopolysaccharide family |
Protein accession | YP_003094144 |
Protein GI | 255533772 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0489] ATPases involved in chromosome partitioning |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACACAGG AAGCAGAAAA AAACCAAAGA AAAACCAGGG AAATTGACTA TTTAAAAATA GCCAGGATAC TGTTTAGTCA TTGGTATCTG GTAGCAGCAA CTATTTTACT GGGTTTACTT CTTGCTTATT TTTACCTGTG GTACACTCCG AAGACATATA CAACATCGGC TGTGCTTAAA TTTGAAGAAA AGAAAACCGA ATTGTCCGAT CTGGTGAGTG CGATGAGCAA CTCAGGCAGG GGCCCGGTTA ACCTGCAAAG TGAAAAATTT ATTATACAAA GCCGCGACTT GCTGCTAAGT GCCATCCGGA GCCTGGATTA TAAAATCAGT TTTTATATAG CAGGCAGGGT ACGGTCTTAT GACTTGTACC CGAATAAGCC AGTTCAGGTC AGCATATTAA AATTTGACAC AGCGCATCCC TTTCTGGGGC TGATTACCTT TAAACCCATA GATAAAAAAA CATTTATGCT GACCTGGAAC GCGGGGGAAA ACGAGATACA GCGGAATTTT CAGTATCACG AGCCAATAAA TATTGAAAAT ATGGGTTTCG TGATCAAATA TCCGGGGCCG CTGAACGCCA ATATTTCCTA CCAGTTTAAG TTCAATACCC CTGAAATTTT ACTGGACCGT GTACGTAATG GATTGCGCAC CAATGAAATT GTGAAGAACT CCAATATTGT TACCATACAG CAAACAGATT CCAACCCCCA GTTTGCAGCA GATATATTGA ATGCGGTAAT GAATGAATAC CTGAACTACG ACCGTGATCA GAAAACGCAA TCGGCTACCC AGATGATCCG CTTCATCAAC GATCAGCAGC AATATCTTTC TTCTGCAGTA AAAGGATCAG AAAGCTCGCT GGAGAAATAC AAACAAAACT CGGGCATACT GGATGTCAGC TCGTCAGCAA ATATGGCCCT TTCAAAAGTA ACGGAACTGG AATCACAGCG GTCATTGTTA AAGATGCAGC TGATGGCAAT AGAGCAGTTG AAAAAACAAA TTACAAACGA CAAGCACAAT GTAAGCCTCA ATTTTAACCT TGAGGGGGTT GTTGATCCTT TGCTTGGCGT ACTGATCGGC AATATGAACA ATTTGCTGGC CGATAAAAAC GTCATGTTAA AAACTTACAA CAGCGGCTCA GAAACTATAG CAGCGCTCAA CGATCAGATT GCGCAGGTTA AAACCGCAGC ACTGCAGAAC ATCAGCTCTT CAAACCAACG GATCCGGAAA AACATGGATT ATCTGGACAG TCAGTTGTCA AGAGCAAACC AGCAGGTGAA TGCACTGCCG GCCGCAGAAA AAAATATGAT CAGTTTGAGG CGCGACTTTG AGATCAATGA AAAAGTATAC TCCTTTTTAT CCGAGAAAAA ACTGGAAGCG CAGATCAATC GCTCCGCAAT TTTACCTGGT GCAACAATCA TTGAACAGGC CCAGGTAAAC AAAGTGCCCG TTTCGCCAAA TGGAAGAGAA ATTTATCGTA CGGCTACTAT ATTTGGGCTG TTAGCTGGTG TTGGAATTAT CCTTTCAGCA AGGGTATTTA ATCCTTACAT TTACGATAAG GAATCGGTTG AGCATGCCAC AACTGTTCCT GTCATCGGCA TCATCAGAAA GTTTCCCGAT CAGATAGATG AGGACAATTC CCAGATTCTT GCTTTAAGCA AACCCAGGTC CCTCTTTGCA GAATCGGTAC GTTCAGTTCG CACCAACCTT AATTTTCTTG CTTCCGGAAA AAAAAGTAAA ATTATCAGCA TCACCTCTGA GGTGGCCGGA GAGGGTAAAT CCTTTGTTGC CCTTAACCTT TCCAGTACAC TTGCGCTGAT TGATAAAAAG GTGATCCTGA TTGGGGCCGA TCTGCGCCGG CCCAAACTAC ATCATGCCTT TGGACTGCCC AATACTACCG GGCTCAGCAA TTACCTTGTC CACCAAAGTA CGGTAAAAGA CATTATCCAG CAAACAGCTT ATAAAAACCT GGATTTTATC AGTTCGGGGC CTATTCCTCC AAACCCGGCA GAACTACTCC ATCACGAACG CATTGCCCTG CTGCTCGATG AGCTCAGGAC AAAGTATGAG GTGATCATGG TTGATACTGC ACCGATCGGC CTGGTTTCTG ACTCCATTCC TTTAATATGC CAGAGCGATA TTAATCTTTT TATCATCCGG TATGGAAAGT CTAAACACAG TGCAGCCACC ATACCCGAGG GCCTCGCCAG GGAATACGGC TTAAACAACA TGGCCATTGT ATTAAATGCT TTTGAAGAAA ACCTTTTGCA GTCGAGCTAT TATAAAAACA GTTCAAATCA TGGCACATTT CATTACTATG CAGATTACAA TGGTTACAAA AGTTCAGGTT ATTACGAAGA TGATGCCCCT GTAAAATGGT GGAATGTGAA AAATTGGTTG AGATCCTAA
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Protein sequence | MTQEAEKNQR KTREIDYLKI ARILFSHWYL VAATILLGLL LAYFYLWYTP KTYTTSAVLK FEEKKTELSD LVSAMSNSGR GPVNLQSEKF IIQSRDLLLS AIRSLDYKIS FYIAGRVRSY DLYPNKPVQV SILKFDTAHP FLGLITFKPI DKKTFMLTWN AGENEIQRNF QYHEPINIEN MGFVIKYPGP LNANISYQFK FNTPEILLDR VRNGLRTNEI VKNSNIVTIQ QTDSNPQFAA DILNAVMNEY LNYDRDQKTQ SATQMIRFIN DQQQYLSSAV KGSESSLEKY KQNSGILDVS SSANMALSKV TELESQRSLL KMQLMAIEQL KKQITNDKHN VSLNFNLEGV VDPLLGVLIG NMNNLLADKN VMLKTYNSGS ETIAALNDQI AQVKTAALQN ISSSNQRIRK NMDYLDSQLS RANQQVNALP AAEKNMISLR RDFEINEKVY SFLSEKKLEA QINRSAILPG ATIIEQAQVN KVPVSPNGRE IYRTATIFGL LAGVGIILSA RVFNPYIYDK ESVEHATTVP VIGIIRKFPD QIDEDNSQIL ALSKPRSLFA ESVRSVRTNL NFLASGKKSK IISITSEVAG EGKSFVALNL SSTLALIDKK VILIGADLRR PKLHHAFGLP NTTGLSNYLV HQSTVKDIIQ QTAYKNLDFI SSGPIPPNPA ELLHHERIAL LLDELRTKYE VIMVDTAPIG LVSDSIPLIC QSDINLFIIR YGKSKHSAAT IPEGLAREYG LNNMAIVLNA FEENLLQSSY YKNSSNHGTF HYYADYNGYK SSGYYEDDAP VKWWNVKNWL RS
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