| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3887 |
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| Symbol | |
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| ID | 8255021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4676809 |
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| End bp | 4679523 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937551 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003094140 |
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| Protein GI | 255533768 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC TCAGCGCATT ATTTTTACTC ATTCATTTCT CAGTTTTTGT ACAGGCACAA
AAACTTGAGG TAGGACAACT GACCTGCAAC TATAAACAAA ATCCGATAGG CACCGATGTA
TTACAGCCTC AATTTAGCTG GAAGTTAAGC GCTACTGAAA GAAATGTAAT GCAGAAAGCT
TATGAACTAA GGGTGGCAAG CAGTGACAAG GACCTCTTAA ATGGAAAAAA CCTTGTCTGG
CAAACTGGTA AGGTAAATTC AGATCAATCT GCCCATGTTA TTTATAAAGG AAGCGCACTG
CAGGCCAAAC AACGCTATTA CTGGCAGGTA CGTGTATGGG ACAACAATGG GAAAGCATCT
GACTGGAGCG TAGTAAACTT CTGGGAGATG GGGTTGTTGT CGCCAAAAGA CTGGTCGGCA
AAATGGATCC AGACCGCCCG CGATACAGAA GGCAAAGTAG GACCCGCACC GATGTTTGGC
CGTAGCTTTA CGGTAGCAAA AGAAATAAAA AATGCGAGAC TCTATATCAC CGCACATGGT
CTTTATGAAG CAAAACTAAA CGGAAAGAAG ATTGGCGACC ACTATTTTAC ACCGGGCTGG
ACAAGTTACC ACAAACGCTT ACAATATCAG ACCTATGATG TGACACAGGC TTTAAAAGCG
GGTAAAAATA CAGCACTGGT TACCATTGGT GACGGATGGT ACCGTGGAAA CCTGGAATTT
AACAATAAAC GCAATTTATA TGGTAAAGAG GTTGGGCTGT TGTTCCAGCT GGAAATTGAA
TATGCAGATG GTAAAAAAGA AACCATCAGT TCTGATCAGG ACTGGAAAAC CTCTTTTGGC
GGTCCGGTAA AGGCCTCCGA TATTTACAAT GGCGAGACTT ATGACGCCCG ACTGGAAAAA
AATGCGCTGG TACAGGATTT TAATACGGGC GATTGGCAGC AGGCTAAAGT GGTTGACCTG
AAAATGGATA ACCTGGTTGC GCCGCTCGGG CCAACCGTAA GTAAGCACGA ACATTTTGCC
CCACTAAAGG TCATCAAAAC CCCTAAAGGT GAAATCGTGA TCGATTTTGG CCAGAACCTG
GTAGGTTGGG CCCAACTGAA AATTAAAGGA AAAGCAGGAG ATACCCTGAC CATTAACCAT
GCCGAGGTAT TGGATAAAGA CGGTAATTTT TATACAGAAA ACCTGAGAAA GGCCAAACAG
GAAAATAAAT ATATACTGAG CGGCACAAAA GTAGATGTGC TGGAACCACA TTTTACTTTT
CAGGGCTTCC GTTATATTAA AATTACGGGT TATAAAGGCA AACTGGACAG CACTACTGTA
AATGCCATTG CAGTATATTC AGACATGAAA CCTACAGGTC TGTTCTCTAC TTCAAACCCC
TTGCTCAACC AGCTGCAAAG TAATATCCAG TGGGGGCAAA AAGGGAATTT TGTAGATGTG
CCTACCGACT GTCCGCAGCG TGACGAGCGT TTGGGCTGGA CTGGCGATGC ACAGGTGTTC
TTCAAAACAG CTGCCTACAA TATGGATGTG GCCGGATTTT TCGACAAATG GCTGCATGAC
CTGAAAGTAG ACCAGCACCC AACCGGAAAT GTGCCAGTGG TAATCCCTGA CGTGCGTACG
ATAAAGAATG CAGGTTCTGC CGGATGGGGC GATGTGGCCA CCATCATCCC ATGGGATTTT
TATCGCGCTT ACGGAGATAA GGAACTGCTT TCGCGTCAAT ACAGCAGTAT GAAAGCCTGG
GTAGAATATA TCCGCAGCAT CAGCAAAAAT AACCTGTGGA ACAGCGGGCC GCATTATGGC
GACTGGCTTT TCTATACGAT GGCCGATGAC CGTGATGGTA AGGCAGCAAT TACAGACAAA
TTTTTTATCG CACAAGCTTT TTATGCGCAT TCTACTCAAA ATCTGATCAA TGCAGCTACA
GTATTGGGCA ATACAGAGGA CGTAAAAGCT TATACTGAAC TGCTCAAAAT AATTAAAAAA
GCTTTCCTGG ATGAATATGT TACCCCTTCA GGAAGACTGG TTTCCAGCTC TCAGACGGCT
TATGTACTGG CCCTGAATTT TGATCTTTTG CCTGAAAATT TAAGGGCCCA GGCCGCACAA
AGACTGGCAG ATAATGTGGC AGCTTATGGC AACCACCTGA CAACAGGGTT TTTAGGTACG
CCATACCTGT GCCATGTCCT TACCCGTTTT GGATACAATG ATGTTGCATA CAAGCTGTTG
TTGCAGGATA CCTATCCGTC ATGGCTATAT CCTGTTAAAA AAGGAGCCAC TACCATTTGG
GAAAGATGGG ATGGCATTAA ACCTGATGGT TCTTTTCAGG CAGTGAGCAT GAATTCTTTT
AACCATTATG CTTATGGAGC AATTGGCGAC TGGATGTACC GTACCGTAAC GGGGATTAAC
GAAACAGCAC CAGGATATAA AGAGATCAGC ATTGCTCCAA AACCTGGAGG CGATCTTAAA
AATGCAGGTG CCGAGCTGGA AACCATGTAT GGCAAAGTAA AATCTGCATG GTCTGTTGCT
GATGGTAAAA CTAAAATTGA CATTGTCGTT CCCCCTAATA CCACTGCCAG AGTTATTTTG
CCGGGAACCG GAAATGCTGT GGTAACGGAA TCTAACGTCG CCCTCAATAA AGCCAAAGGA
TTAAGAGCCA TTAAAAATGT GGATAACAAT ACCGAGCTTA CTGCAGGTTC TGGTACTTAT
CATTTTGAAT ATTAA
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| Protein sequence | MNKLSALFLL IHFSVFVQAQ KLEVGQLTCN YKQNPIGTDV LQPQFSWKLS ATERNVMQKA
YELRVASSDK DLLNGKNLVW QTGKVNSDQS AHVIYKGSAL QAKQRYYWQV RVWDNNGKAS
DWSVVNFWEM GLLSPKDWSA KWIQTARDTE GKVGPAPMFG RSFTVAKEIK NARLYITAHG
LYEAKLNGKK IGDHYFTPGW TSYHKRLQYQ TYDVTQALKA GKNTALVTIG DGWYRGNLEF
NNKRNLYGKE VGLLFQLEIE YADGKKETIS SDQDWKTSFG GPVKASDIYN GETYDARLEK
NALVQDFNTG DWQQAKVVDL KMDNLVAPLG PTVSKHEHFA PLKVIKTPKG EIVIDFGQNL
VGWAQLKIKG KAGDTLTINH AEVLDKDGNF YTENLRKAKQ ENKYILSGTK VDVLEPHFTF
QGFRYIKITG YKGKLDSTTV NAIAVYSDMK PTGLFSTSNP LLNQLQSNIQ WGQKGNFVDV
PTDCPQRDER LGWTGDAQVF FKTAAYNMDV AGFFDKWLHD LKVDQHPTGN VPVVIPDVRT
IKNAGSAGWG DVATIIPWDF YRAYGDKELL SRQYSSMKAW VEYIRSISKN NLWNSGPHYG
DWLFYTMADD RDGKAAITDK FFIAQAFYAH STQNLINAAT VLGNTEDVKA YTELLKIIKK
AFLDEYVTPS GRLVSSSQTA YVLALNFDLL PENLRAQAAQ RLADNVAAYG NHLTTGFLGT
PYLCHVLTRF GYNDVAYKLL LQDTYPSWLY PVKKGATTIW ERWDGIKPDG SFQAVSMNSF
NHYAYGAIGD WMYRTVTGIN ETAPGYKEIS IAPKPGGDLK NAGAELETMY GKVKSAWSVA
DGKTKIDIVV PPNTTARVIL PGTGNAVVTE SNVALNKAKG LRAIKNVDNN TELTAGSGTY
HFEY
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