| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3856 |
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| Symbol | |
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| ID | 8254990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4626509 |
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| End bp | 4627207 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937520 |
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| Product | phosphoribosyltransferase |
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| Protein accession | YP_003094109 |
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| Protein GI | 255533737 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTTAT TGAAACGGAT TTTGGGCGAC CTGTTCAGTC TTTTATTTCC CAGCCTTTGT
TGCGGATGTG GTACGGACCT GTACACCGGC GAACAGTTAC TCTGTACCGA ATGTTTATAT
AACCTTCCTT ATACCGATTA CCACCTGCAT ACCGAAAATA AGGCGGCAAA ACAATTATGG
GGCAGGCTCC CCTGTAATGC AGTAATGTCT TTATTCTATT TTAAAAAAGG GGCAAGGACG
CAAAACCTGA TACATAACCT GAAATATAAA GGCAGGAAGG ATTTGGGGAT AAAACTGGGG
AATATGATTG CAGAAAAACT ACTGACAGCA CCTGCTTATA CAGGGATTGA TATTATTGTA
CCGGTACCAC TGCACAAAAG CAGGGAAAGA GTAAGGGGTT ACAACCAAAG TTGCAGCATC
GCCGAAGGCA TTGCTGCAGG ATTAAATATT CCGCTAAGTA CAGATGGCCT GGTACGAATA
AAAAAAACCA GCAGCCAGAC GAAAAAAGGG CGCTATCAAC GCTTTGAAAA TATGCAAAGC
GTATTTTCTG TTAAGGATGC ATGGGCTTTT AAAGACAAAC ACGTATTGCT GGTGGATGAT
GTGTTGACCA CCGGTGCCAC CCTGGAAGCT TGTGGAATGG TACTGCTGGA AGCTAAAATT
GCAAAACTGA GCATAGCAAC CGTTGCCTAT GCGGAATAA
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| Protein sequence | MMLLKRILGD LFSLLFPSLC CGCGTDLYTG EQLLCTECLY NLPYTDYHLH TENKAAKQLW
GRLPCNAVMS LFYFKKGART QNLIHNLKYK GRKDLGIKLG NMIAEKLLTA PAYTGIDIIV
PVPLHKSRER VRGYNQSCSI AEGIAAGLNI PLSTDGLVRI KKTSSQTKKG RYQRFENMQS
VFSVKDAWAF KDKHVLLVDD VLTTGATLEA CGMVLLEAKI AKLSIATVAY AE
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