| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3795 |
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| Symbol | |
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| ID | 8254929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4553101 |
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| End bp | 4554516 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937459 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_003094048 |
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| Protein GI | 255533676 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAG AAGTATTGTA CCTGAAAATT GCCGGTACGG TTGAGCAGCA GATTGCTTCC
GAAACCCTCA AGGTGGGCGA CAAATTGCCC TCTATCCGTA CCGTACAAAA GATTTACAAT
GTAAGCCTGA ATACCGTTAA ACAAGCATTT TTAGAACTGG AAAGCAAATC GCTGATCGAA
TCCAGGCCTA AATCGGGCTA TTATGTCAGC AATTCTTATG GCCGCAGGCT TTCCATTCCC
GATACCAGCA AGCCAAAGTT GTACGATAAA GAAAAACATC CTGAAGACCT GATCACCAGG
GTTTTTGATA CCCTGTACTA CAAAGACATT ACCAAGTTTT CCTTAGGTGT ACCTGCCAAC
GGCTTATTAC CTATTGCCAA ATTAAACAAA GGGGTAATCA AAGCCATGCG TAACCTGGAA
GGGAGTGGTA CGGCCTACGA ACCTGTACAG GGCAGTGTAA ACTTACGGCG GAACATATCC
CGCTGGTCTT TTGTTTGGGC CGGTCAGCTC ACCGAGAATG ATGTGGTAAC TACCTCGGGT
GCTATGAATG CCCTGTACAA TTGCTTTATT GCCGTTACCA AACCTGGTGA TACCATTGCC
CTGGAAAGCC CTATATATTT TGGGATATTA CAGATGGCGC GCGAGCTGGG CCTAAAAATT
ATTGAACTGC CTACTCATCC GGTTACCGGG ATTGAAATAG ATGCTTTGAA AAAAATCCTG
CCCGTTATTA AAGCCTGTTG CCTGGTCAGC AATTTCAACA ATCCTCTCGG CAGCTGTATG
CCCGATGAGC ATAAAAAAGA GGTGGTCAGG CTGCTTACCC AGCATAACAT ACCATTGATT
GAGGATGACC TTTATGGCGA TATTTTTTTC GGAACTACAC GTCCGGTACC CTGCAAATAC
TATGATGAGG CCGGAATGGT CATGTGGTGC GGTTCCTTTT CCAAGTCCCT GGCTCCGGGT
TACAGAGTAG GCTGGGTAGC TCCGGGGAAG TTCAAAGAAA AGATCATCAG GCAGAAATTG
TTACAAACCA TATCAACACC CCCGCTTTAC CAGGAAGTAA TTGCCGATTT TATGGAGCAT
GGGCGTTACG ACCATCACCT GCGGACTTTA AGACATAAGT TATATACCAA CTGCCTTCAA
TACCAGCGGG CAATAACAGA TTACTTTCCC GAAAACACAA AGGTAACACA ACCCCAGGGA
GGCTTTGTAT TGTGGCTGGA GCTCGATAAG AGAATAGATA CCGCAATGCT CTATAACCAG
GCCATCAAAC AGAACATCAG TTTTGCGCCC GGCCGCATGT TTACCCAACA CAATCAGTTT
AACAATTGCA TGCGCTTAAA TTTTGGGCTC AAATGGGATG AAAAACTGGA GTCTGACTTA
AAACGGCTGG GGAAGATTGT GAAGAACGCT TTATAG
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| Protein sequence | MSKEVLYLKI AGTVEQQIAS ETLKVGDKLP SIRTVQKIYN VSLNTVKQAF LELESKSLIE
SRPKSGYYVS NSYGRRLSIP DTSKPKLYDK EKHPEDLITR VFDTLYYKDI TKFSLGVPAN
GLLPIAKLNK GVIKAMRNLE GSGTAYEPVQ GSVNLRRNIS RWSFVWAGQL TENDVVTTSG
AMNALYNCFI AVTKPGDTIA LESPIYFGIL QMARELGLKI IELPTHPVTG IEIDALKKIL
PVIKACCLVS NFNNPLGSCM PDEHKKEVVR LLTQHNIPLI EDDLYGDIFF GTTRPVPCKY
YDEAGMVMWC GSFSKSLAPG YRVGWVAPGK FKEKIIRQKL LQTISTPPLY QEVIADFMEH
GRYDHHLRTL RHKLYTNCLQ YQRAITDYFP ENTKVTQPQG GFVLWLELDK RIDTAMLYNQ
AIKQNISFAP GRMFTQHNQF NNCMRLNFGL KWDEKLESDL KRLGKIVKNA L
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