Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3765 |
Symbol | |
ID | 8254897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4510493 |
End bp | 4511413 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937427 |
Product | inner-membrane translocator |
Protein accession | YP_003094018 |
Protein GI | 255533646 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00344833 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAG AACTTTTAAA AAACAATACC TTAATTATAT TTTTAATATT ACTTGTCGTA TCAAGTCTGG TCTCCAACTC CTTTCTTACC GGTAATAACC TGTCCAACCT CTTGCGACAG GTGGCACCCA TCGGTCTGAT CAGTATCGGC ATGTTCCTGG TAATACTTAC CGGTGGAATC GACTTATCTG TAGGGTCTAT TGTTGCAACC ATCGGTGTGG TATTTGCCCT ATTGTCTTAT GAAGTCTATT TCCCGGTGGC CTTGACGATC TCTCTTGCAC TTGGCATTGG CATAGGGCTG CTTTCTGGTT ACCTCGTTGC CTACCGGAAG ATCGCACCCT TTATCGCTAC GCTGGCGATG ATGACTATTG TTCGTGGTGC AGGTTTTCTG TTTTCAAAAG GTGCACCCAT TAGTGTTGGG CCACATTCCT CAGCCATATT GACTTTAGGC ACAGGGGCTT TTTTAGGTAT ACCGTATTCT GCATGGATCC TGATGATCGT GTTTGCTGCG GTATATATGG TTGTGCGTTA TCATGTTTTC GGGCGGAAAA TTTTTGCTGT TGGCTCTAAC GAAGAAGCCG TGCGTTTGTC GGGGATATCA GTTGAAAGCG TGAAGTTTTC AGTGTATGTG ATCGCTGCAT TTTTTACCGC TATCGCTGCA TTGATGATGG TTGGACGAAC TGGTGTCGGG ACTGCAAATA TTGGCATTGG ACTGGAACTG GATGCAATCG CCGCGGTAGT GATTGGTGGG GCTAGTTTAT CAGGAGGAAG AGGATCTGTG CTGAATACTC TGCTTGGGGT ATTGATATTG GGTATGATCG GTAACATTAT GAACCTTTTA GATGTTACTT CCTATTTACA GCAACTGATC AAAGGGGTAA TTATCATTTT AGCCGTAGTT TTTCAACGCA ATCAAAAATA A
|
Protein sequence | MKKELLKNNT LIIFLILLVV SSLVSNSFLT GNNLSNLLRQ VAPIGLISIG MFLVILTGGI DLSVGSIVAT IGVVFALLSY EVYFPVALTI SLALGIGIGL LSGYLVAYRK IAPFIATLAM MTIVRGAGFL FSKGAPISVG PHSSAILTLG TGAFLGIPYS AWILMIVFAA VYMVVRYHVF GRKIFAVGSN EEAVRLSGIS VESVKFSVYV IAAFFTAIAA LMMVGRTGVG TANIGIGLEL DAIAAVVIGG ASLSGGRGSV LNTLLGVLIL GMIGNIMNLL DVTSYLQQLI KGVIIILAVV FQRNQK
|
| |