Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3736 |
Symbol | |
ID | 8254868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4458180 |
End bp | 4461290 |
Gene Length | 3111 bp |
Protein Length | 1036 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644937398 |
Product | acriflavin resistance protein |
Protein accession | YP_003093989 |
Protein GI | 255533617 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.504437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATTT CAACCACGAG TATAAAAAGG CCGGTACTGG CCATAGTGAT GAACCTGATG ATCCTTTTGT TCGGGGTAAT CGGCTATAAC TTTCTGGGTA TACGTGAATA TCCGAACATT GACCCTACTG TAATCAATGT ACGGACGTCC TATCCGGGTG CAAACTCAGA CATCATTGAA TCGCAGATCA CAGAACCGCT GGAAAAATCC ATCAACGGGA TAGATGGGAT CAGGAACATC TCCTCCTCCA GCAACCAGGG CAGCAGTAAC ATCACCATTG AGTTTAACCT GAACAAGAAT ATTGATGATG CCGCTAACGA TGTGCGCGAT AAAGTATCGG AAGCAGCAAG AAGGTTACCC AAAGATATTG ACGGCAACCC GGTAGTGAGC AAGGCCGATG CCAACTCGGA CGCAGTGATC ACGATGACCG TACAAAGCGA CAAGCGCAAT GTAATGGAGC TGAGCGATTA TGCAGAGAAT GTAATTGCCG ACAGGCTGCA GACCATTACC GGGGTAAGTA GCATCCAGAT CATGGGGCAA AGGAAATATG CCATGCGGAT CCGCATTTCG CCGGATAAGC TGGCCGCTTA TGGCTTAACG TCCCAGGATA TTGTTGCAGC ACTGGACAGG GAAAATGTGG AACTGCCTTC CGGAAAAATA ACCGGATCAA ATACGGAGCT GATTGTAAAG ACCCTTGGAA AATTAACCAA TGCCGAACAG TTCAATAACC TGATCCTGAA GAACGATACC GATAATGTGG TGCGTTTAAA GGATGTTGGT TTTGTGGAGC TGGGATCAGA AAACGAGGAG ACCATATTGA GGGAATCCGG CAAACCGATG GTTGCTGTAG GCCTGATCCC GCAACCCGGC GCCAATTATC TCGACATCTC CAAGGAGTTT GACAAAAGGT TTGCCCAGCT GGAGAAAGAT GTGCCCCAGG ACATTAAGCT GAACATATCC CTGGACACAA CCAAGTTTAT CAAAGCCTCG GTAACTGAAG TGGCAGAAAC CATTATTTTA TCGCTCATCC TGGTGATCCT GATCATTTAC CTGTTTTTCA GGGACTGGGC CATCGCCATC CGTCCGCTGA TCGACATTCC GGTATCCCTG GTGTTTACCT TTTTTATCAT GTACATTTTT GGGTTCTCTA TCAATGTACT GTCGCTATTG GCCGTGGTTT TGGCAACAGG CCTGGTGGTG GACGACGGTA TTGTGGTTAC AGAGAACATT TTCAAAAAAG TAGAGGAGGG CTATTCGCCT TTTGAAGCTG CAATAAAGGG TTCCAACGAG ATCTTTTTTG CCGTCATCTC TATTTCCATT ACCCTTGCCG CCGTGTTTTT ACCGGTCATC TTTTTACAGG GCTTTGTAGG CCGTCTGTTC AGGGAATTTG GGGTGGTAAT CGGCGCTGCT GTACTGATCT CTGCATTTGT GTCGCTTACC CTGACACCCA TGCTGAATGC CTACCTGATG AAAAAAACAG GGCACAAAAA ATCGAGGTTC TATGAACTGA CAGAGCCTTA TTTTGTAAAG CTAAATGATG GCTATGCCGA AAAACTGAAT AAATTTCTGG ACCGGAAATG GCTGGCCATA CCCATTATAG TGGCCTGTGT AGGGATCATT GTATTGTTCT GGAAAATATT GCCCAAAGAA ACCGCACCTT ATGACGACCG CAGTGCGATA AACATGAACC TGACCACACC TGAAGGTTCT TCTTTTGCCT ATACCGACCG GTTTATGATG AAAGTACAGG ACATGATCAA TGATTCTGTG CCTGAAAAGA AAGTGAACAT CACCATTACT TCACCGGGCT TTGGGGGCAC AGGTGCTACC AACAGTGGTT TTGTTAGAAT GGGGCTGGTA GATCCGGGCG ACAGGGAGCG CACGCAGGCA GATATTGCTG CAAAACTGAC CAAAATTACC AGGAAATACT CAGAAGGCAA GGTTACAGTT ACCCAGCAGC CTACCATTTC TGTGGGCCGG CGCGGTGGTT TACCGGTAAA TTATATCATC CAGGCACAGA ACTTTGAAAA ACTAAGGGAA AAAGTGCCTT TGTTTATGGA TGAGGTTTCG AAAGATCCGA CTTTTACCAC TTCGGACGTA AACCTGAAAT TTAATAAGCC TGAGATTGAC CTGACCATAG ACAGGGACAA AGCCAAAAAC CTGGGTGTTT CAGTAGCCGA TATTGGTACG GCCCTGCAAC TGGGCTTAAG TGGCCAGCGT TTTTCCTATT TCTTCATGAA TGGCAAACAA TACCAGGTGA TCGGGCAGTT TGAAGTGGGC GACCGTAAGG ATCCGCTTGA CCTGAGTTCG GTATATGTAA GGAACGATAA AAATGAACTG ATACAGCTGG ACAATGTGGT AACGGCTAAA GAAGAAAGCA GTCCCCCTCA ATTGTACCGC AACAACCGTT TTACGGCAGC CACAGTTTCG GCAGGCCTTG CACCGGGCAA AAGCATCGGG GAAGGAATAG CCGCGATGGA CAGGATTGCA GAGAAGGTAC TGGACGAATC TTTCTCTACC GATCTTGGTG GGGAATCGAG GGACTTTAAG GAAAGTTCTT CCAATACGCT CTTTGCCTTT GGCCTGGCTT TATTGCTGGT TTACCTGATC CTGTCGGCAC AGTTTGAAAG CTTTATTGAC CCGATCATCA TTATCCTGAC CGTTCCGATG GCTGTTGCAG GTGCATTTCT ATCCCTCTGG CTGTTCGGAC AAAGCTGGAA CATCTTTAGC CAGATCGGTA CCATCATGCT CATTGGTCTG GTGACCAAAA ACGGCATCCT GATTGTAGAA TTTGCCAACC AGCTGAAAGA AAAAGGCAAA AGTGTACATG ATGCCATCAG GGAAGCTTCG GTTTCGAGGC TGCGCCCGAT TCTGATGACC AGTCTGGCCA TTGCTATCGG CGCCCTGCCC ATTGCCATGG CGCTGGGTGC TGCAGCCAAG AGCCGCATGG GTATGGGGAT CGTAATTGTA GGCGGAACAA CCTTTGCATT GATCCTGACC CTATTTGTAA TCCCTGCAAT TTATTCGTAC TGGTCTAAAG AACACAAAAC AAATACAGAA TTGGAACTTT CATTAAAAGC AGCATTAGAA CATGAGAAAG ATGAAAAGTA G
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Protein sequence | MSISTTSIKR PVLAIVMNLM ILLFGVIGYN FLGIREYPNI DPTVINVRTS YPGANSDIIE SQITEPLEKS INGIDGIRNI SSSSNQGSSN ITIEFNLNKN IDDAANDVRD KVSEAARRLP KDIDGNPVVS KADANSDAVI TMTVQSDKRN VMELSDYAEN VIADRLQTIT GVSSIQIMGQ RKYAMRIRIS PDKLAAYGLT SQDIVAALDR ENVELPSGKI TGSNTELIVK TLGKLTNAEQ FNNLILKNDT DNVVRLKDVG FVELGSENEE TILRESGKPM VAVGLIPQPG ANYLDISKEF DKRFAQLEKD VPQDIKLNIS LDTTKFIKAS VTEVAETIIL SLILVILIIY LFFRDWAIAI RPLIDIPVSL VFTFFIMYIF GFSINVLSLL AVVLATGLVV DDGIVVTENI FKKVEEGYSP FEAAIKGSNE IFFAVISISI TLAAVFLPVI FLQGFVGRLF REFGVVIGAA VLISAFVSLT LTPMLNAYLM KKTGHKKSRF YELTEPYFVK LNDGYAEKLN KFLDRKWLAI PIIVACVGII VLFWKILPKE TAPYDDRSAI NMNLTTPEGS SFAYTDRFMM KVQDMINDSV PEKKVNITIT SPGFGGTGAT NSGFVRMGLV DPGDRERTQA DIAAKLTKIT RKYSEGKVTV TQQPTISVGR RGGLPVNYII QAQNFEKLRE KVPLFMDEVS KDPTFTTSDV NLKFNKPEID LTIDRDKAKN LGVSVADIGT ALQLGLSGQR FSYFFMNGKQ YQVIGQFEVG DRKDPLDLSS VYVRNDKNEL IQLDNVVTAK EESSPPQLYR NNRFTAATVS AGLAPGKSIG EGIAAMDRIA EKVLDESFST DLGGESRDFK ESSSNTLFAF GLALLLVYLI LSAQFESFID PIIIILTVPM AVAGAFLSLW LFGQSWNIFS QIGTIMLIGL VTKNGILIVE FANQLKEKGK SVHDAIREAS VSRLRPILMT SLAIAIGALP IAMALGAAAK SRMGMGIVIV GGTTFALILT LFVIPAIYSY WSKEHKTNTE LELSLKAALE HEKDEK
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