Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3707 |
Symbol | |
ID | 8254839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4419116 |
End bp | 4420180 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937369 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003093960 |
Protein GI | 255533588 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA TAATCATAGC AGTCCTGATC ATCATAGTTG CCGGAGGAGG AATTGCCCTG GTGTTAAGCA ACAATAAGAA AAAGAATGCA GCTAAAACTG CAATTGTTGC AGCAGGTGGA GGTGCAGTGA GTGTACGTAC TGCAACGATC AAAAAAGCCC CCATTGACCT TGATTTTAGC GTTAACGGAA CGTTTGCCCC CAATCAGGAG TTAAACTTCC TTTCAGAAAA TGCAGGTCGC GTTACTAAAA TATTTGTGGA AGAAGGTTCC AGAGTGAGTA AAGGCCAGAT TTTAGCACGT ATTGATGCCG AGATCATAAA TACGGACAAA GAAACAGCCG AAGCAAATTT ACAAAATGCC ATCAGGGATG AAGCCAGGTA TGCAAGCTCG TTTAAAACTG GTGGAGTTAC GCAACAACAG CTGGATCAGG CTAAACTGGC AGTAGAAAAT GCACGTTTAA GGTTGCAAAG CGCTACAAGA AAAGTAAGTG ATGCCAACAT AAAATCGCCA ATCAACGGTA TAGTCAATAA AAAATATATT GAAGTAGGTG CATTTGTAAA TGCACAGGGA ACACAAATGT TTGAACTGGT TGACGTTTCC AAACTAAAAC TGAAGGTAAA CGTAAATGAA AGCCAGGTAG CCAGCTTAAA AATCGGCGAC AAGGTACAGA TAAAATCCAA TGTTTTTCCT GCCGATGATT ATACCGGAAC CATTACTTTT ATTGCCGCTA AGGCCGACAA TTCCCTGAAC TTCCCAATTG AAATTCAGGT AGAAAACAAC GGTAAGCACG ACATTAAAGC CGGTATGTAT GGAACAGCCA TTTTTAAGTT CCCAAAACAG GCGCCTATCC TGACCATCCC ACGTGGCTCA TTTGTAGGCA GTGTAAGCAG CAATCAGATT TTTGTATTGG AAAATGGAAA TACAGCCAGG CTTCGTAAAG TTATTGCAGG CAGAATTATT GGTGACAATG TTGAGGTCAT TCAAGGTTTG CAAGAAGGAG AAACTGTAAT CACAAGCGGA CAAATCAATC TGGTAGACGG CAGTGCCGTA GCACCAGTAA AATAA
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Protein sequence | MKRIIIAVLI IIVAGGGIAL VLSNNKKKNA AKTAIVAAGG GAVSVRTATI KKAPIDLDFS VNGTFAPNQE LNFLSENAGR VTKIFVEEGS RVSKGQILAR IDAEIINTDK ETAEANLQNA IRDEARYASS FKTGGVTQQQ LDQAKLAVEN ARLRLQSATR KVSDANIKSP INGIVNKKYI EVGAFVNAQG TQMFELVDVS KLKLKVNVNE SQVASLKIGD KVQIKSNVFP ADDYTGTITF IAAKADNSLN FPIEIQVENN GKHDIKAGMY GTAIFKFPKQ APILTIPRGS FVGSVSSNQI FVLENGNTAR LRKVIAGRII GDNVEVIQGL QEGETVITSG QINLVDGSAV APVK
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