Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3692 |
Symbol | |
ID | 8254823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4405392 |
End bp | 4406381 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937353 |
Product | FecR protein |
Protein accession | YP_003093945 |
Protein GI | 255533573 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.172951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAGAGA AAGAGCAATT TAAACACTTA TACCAGCTTT ATTTAAACAA CCTCTGCAAT GCGGAGGAAC TTAAACAGTT TTTTGAGCTG CTGAACAGGA ACAGGGACGA TCAGGGAATT AGCGCCATGC TTTCGGATAC CTGGGACCGT ACAGATTTAA CTCCCGAAAC AGGCCTTGTT CCTACATTTA TAGATCAGCC ATTAAAAACA GTAAAACTAA CCCCTATCAG GCGATCAGTA TTTGGCCTGC GAAGATTTAT GACAGCAGCA GCTGTATTGT TGGTTTTAAC AGGGATATAT TTTTACAGAG CTGATATAGC AAAGGTATTC AACCCTGTGG CCAAAGCCCA GCTGTTCAGT TCTGCTGGCG AACGCAAACA AATCCGGCTG GCCGATGGTA CCAAAGTATG GCTGAGCCGG AACAGTAAAC TGAGTTATCC GGATAAATTT GAAGGGCCTG ACCGCCAGGT AAGTCTCGAA GGAGAGGCCT TTTTCGAAGT AACCCATGAT AGCAGCCATC CTTTTATCAT TAAGAGTGGG GCAGTAAGTA CAACCGTACT GGGCACCAGC TTTAACGTTA GTGCATACAA ACAACAACAC ACTATAAATG TTACCCTGGT TACTGGTAAG GTGACCGTGG CCCTTAATGG CCAGAACAAT ACCAAGCGTG ATACCATTGT AGCCAATCAA CAGTTGATTG TTGATAAAAT TACATCCAGT ATCACAAAGC TAAACTATCC GGATGCGGCT GCTTTCCTGA ACAGGAGGTT AGGCCTGTAT GAATACAGGG GAGCAGCACT TCAGGAAGTT CAGCAAGACC TCGAAAACCA ATACAACATC AAAATTGAAC TTGGTCCCGG CTTAGCTGCC GCCACTTTTT ATGGTAACCT GAACATGACA GATGCACTTC ATGAAACTTT AAATAAACTA TGTACGGTAA TGGAAACTAA ATGGAAGAAA GATGGAGGAC ATTATGAGCT GATAAAATAA
|
Protein sequence | MKEKEQFKHL YQLYLNNLCN AEELKQFFEL LNRNRDDQGI SAMLSDTWDR TDLTPETGLV PTFIDQPLKT VKLTPIRRSV FGLRRFMTAA AVLLVLTGIY FYRADIAKVF NPVAKAQLFS SAGERKQIRL ADGTKVWLSR NSKLSYPDKF EGPDRQVSLE GEAFFEVTHD SSHPFIIKSG AVSTTVLGTS FNVSAYKQQH TINVTLVTGK VTVALNGQNN TKRDTIVANQ QLIVDKITSS ITKLNYPDAA AFLNRRLGLY EYRGAALQEV QQDLENQYNI KIELGPGLAA ATFYGNLNMT DALHETLNKL CTVMETKWKK DGGHYELIK
|
| |