Gene Phep_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3692 
Symbol 
ID8254823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4405392 
End bp4406381 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content43% 
IMG OID644937353 
ProductFecR protein 
Protein accessionYP_003093945 
Protein GI255533573 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.172951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGAGA AAGAGCAATT TAAACACTTA TACCAGCTTT ATTTAAACAA CCTCTGCAAT 
GCGGAGGAAC TTAAACAGTT TTTTGAGCTG CTGAACAGGA ACAGGGACGA TCAGGGAATT
AGCGCCATGC TTTCGGATAC CTGGGACCGT ACAGATTTAA CTCCCGAAAC AGGCCTTGTT
CCTACATTTA TAGATCAGCC ATTAAAAACA GTAAAACTAA CCCCTATCAG GCGATCAGTA
TTTGGCCTGC GAAGATTTAT GACAGCAGCA GCTGTATTGT TGGTTTTAAC AGGGATATAT
TTTTACAGAG CTGATATAGC AAAGGTATTC AACCCTGTGG CCAAAGCCCA GCTGTTCAGT
TCTGCTGGCG AACGCAAACA AATCCGGCTG GCCGATGGTA CCAAAGTATG GCTGAGCCGG
AACAGTAAAC TGAGTTATCC GGATAAATTT GAAGGGCCTG ACCGCCAGGT AAGTCTCGAA
GGAGAGGCCT TTTTCGAAGT AACCCATGAT AGCAGCCATC CTTTTATCAT TAAGAGTGGG
GCAGTAAGTA CAACCGTACT GGGCACCAGC TTTAACGTTA GTGCATACAA ACAACAACAC
ACTATAAATG TTACCCTGGT TACTGGTAAG GTGACCGTGG CCCTTAATGG CCAGAACAAT
ACCAAGCGTG ATACCATTGT AGCCAATCAA CAGTTGATTG TTGATAAAAT TACATCCAGT
ATCACAAAGC TAAACTATCC GGATGCGGCT GCTTTCCTGA ACAGGAGGTT AGGCCTGTAT
GAATACAGGG GAGCAGCACT TCAGGAAGTT CAGCAAGACC TCGAAAACCA ATACAACATC
AAAATTGAAC TTGGTCCCGG CTTAGCTGCC GCCACTTTTT ATGGTAACCT GAACATGACA
GATGCACTTC ATGAAACTTT AAATAAACTA TGTACGGTAA TGGAAACTAA ATGGAAGAAA
GATGGAGGAC ATTATGAGCT GATAAAATAA
 
Protein sequence
MKEKEQFKHL YQLYLNNLCN AEELKQFFEL LNRNRDDQGI SAMLSDTWDR TDLTPETGLV 
PTFIDQPLKT VKLTPIRRSV FGLRRFMTAA AVLLVLTGIY FYRADIAKVF NPVAKAQLFS
SAGERKQIRL ADGTKVWLSR NSKLSYPDKF EGPDRQVSLE GEAFFEVTHD SSHPFIIKSG
AVSTTVLGTS FNVSAYKQQH TINVTLVTGK VTVALNGQNN TKRDTIVANQ QLIVDKITSS
ITKLNYPDAA AFLNRRLGLY EYRGAALQEV QQDLENQYNI KIELGPGLAA ATFYGNLNMT
DALHETLNKL CTVMETKWKK DGGHYELIK