Gene Phep_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3664 
Symbol 
ID8254795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4378088 
End bp4378879 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content42% 
IMG OID644937325 
Productprotein of unknown function DUF147 
Protein accessionYP_003093917 
Protein GI255533545 
COG category[S] Function unknown 
COG ID[COG1624] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00159] conserved hypothetical protein TIGR00159 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCT TGGATTTCGA TTTTCTGAAG GTATCTTTTA CCGATGCGGT AGACATTATT 
CTTGTCGCGC TGATCATTTA TTATATCTAT AACCTGATCA AAAATACACT TGCTGTAAAT
CTTTTATTGG GTATGGTGAT TATCCTGGTG ATCCACTGGG TGGTAGATGC CCTGCACATG
AACCTGCTGT CGAGCATTAT TAATCAGTTT ATGAGTGTAG GGATCATTGC ACTGATCATC
ATTTTTCAGC CCGAGATCAG GCGTTTCCTG CTCCTTATTG GTAAAAACAC GTTTTTACAG
CAGAATAAGG CCTGGTGGGG TTATCTCTTT GGCAGTAAGA ATATAGAACA AAACAACCTG
ATCAGGATTA AGCCTGTTAT TGATGCCTGC AAAAGCATGA AAAAATCAAG AACGGGTGCG
CTGATCGTTT TTGTTAAATT TTATGATGAC CAGCTTTTTG CGAATAGCTG CGAAATTATA
GATTCTAAAA TTTCCAAACG CTTACTGGAA AGCATTTTTC AGAAATACAG CCCGCTGCAT
GATGGGGCGG TGGTGATTGC CGAAAATAAG ATTAAAAGTG CCAGCTGTAT TTTACCACTG
ACGGACAATG ATAAATTGCC ACCACAGTTT GGCTTAAGGC ACAGGGCCGG TATTGGCGTA
TCGGAAACTA CGGATGCTGT TGCGGTGATC ATCTCTGAGG AGACCGGTGA GATTGCCTAT
GCCAAGCAGG GACGGGTACG GATGAATGTT TCTTTTGGAG AGCTGGAGAA ATTGCTGAAC
AAAGATTTTT AA
 
Protein sequence
MKSLDFDFLK VSFTDAVDII LVALIIYYIY NLIKNTLAVN LLLGMVIILV IHWVVDALHM 
NLLSSIINQF MSVGIIALII IFQPEIRRFL LLIGKNTFLQ QNKAWWGYLF GSKNIEQNNL
IRIKPVIDAC KSMKKSRTGA LIVFVKFYDD QLFANSCEII DSKISKRLLE SIFQKYSPLH
DGAVVIAENK IKSASCILPL TDNDKLPPQF GLRHRAGIGV SETTDAVAVI ISEETGEIAY
AKQGRVRMNV SFGELEKLLN KDF