| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3654 |
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| Symbol | |
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| ID | 8254785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4368016 |
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| End bp | 4369008 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937315 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_003093907 |
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| Protein GI | 255533535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00566269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTG CAGTAGTTGG TGCTACCGGT CTGGTAGGCA CCGTAATGTT AAAAGTATTA
GAAGAGCGTA ACTTCCCGTT AACTGAATTG ATCCCTGTAG CTTCTGAAAA GAGCGTTGGT
AAGCAAATCA CGTTCAAGGG TAAGCAGTAC GCTGTTGTAA ACATGGATAC TGCGATTTCG
ATGAGACCTG ATATTGCGTT GTTTTCTGCA GGTGGCAGCA CTTCATTGGC TGAAGCCCCT
CGTTTTGCTG CGGTAGGTAC TACAGTGATC GACAATTCAT CTGCATGGCG CATGGATCCG
TCGAAAAAGC TGATCGTACC TGAAGTAAAT GCCAATGTTT TGTCGGCCGA CGACAAGATC
ATTGCCAATC CTAACTGTTC AACTATCCAA ATGGTAGTGG CCTTAAAGCC ACTTCATGAT
AAATATAAGA TCAAACGCGT AGTCGTTTCT ACCTACCAAT CCGTTACCGG AACAGGTGTT
AAAGCTGTTG ACCAGCTGAT GAACGAGCGT AAAGGTATTA CAGATGGCCC TATGGCTTAT
GCCTATCCTA TTGATTTAAA CGTAATCCCT CAGATTGATG TTTTCCAGGA TAACGGCTAT
ACCAAAGAGG AAATGAAAAT GATCCTGGAA ACCCAGAAAA TTATGGGCGA TAACAGCATC
AGGGTTACGG CAACTACAGT ACGTATCCCG GTAATGGGAG GGCACTCTGA ATCGGTAAAC
ATAGAGTTTG AGCATGATTT TGATGTTGCT GAAGTAAAAG ACCTGCTGGC CAATACTGAA
GGGGTGATTT TGGTAGACGA CCCGGCAAAC CTGAAATACC CGATGCCTAA AGATGCACAT
GAGAAAGATG AAGTATTTGT AGGCAGGATA AGAAGGGATG AATCGTTACC AAATACATTG
AATATGTGGA TTGTAGCAGA TAACCTGCGT AAAGGTGCTG CAACAAATGC TGTTCAGATT
GCGGAATACC TGGTAAAAGA AGAACTGATA TAA
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| Protein sequence | MKIAVVGATG LVGTVMLKVL EERNFPLTEL IPVASEKSVG KQITFKGKQY AVVNMDTAIS
MRPDIALFSA GGSTSLAEAP RFAAVGTTVI DNSSAWRMDP SKKLIVPEVN ANVLSADDKI
IANPNCSTIQ MVVALKPLHD KYKIKRVVVS TYQSVTGTGV KAVDQLMNER KGITDGPMAY
AYPIDLNVIP QIDVFQDNGY TKEEMKMILE TQKIMGDNSI RVTATTVRIP VMGGHSESVN
IEFEHDFDVA EVKDLLANTE GVILVDDPAN LKYPMPKDAH EKDEVFVGRI RRDESLPNTL
NMWIVADNLR KGAATNAVQI AEYLVKEELI
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