| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3605 |
|---|
| Symbol | |
|---|
| ID | 8254736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4312484 |
|---|
| End bp | 4313029 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644937266 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003093858 |
|---|
| Protein GI | 255533486 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAC TAAAATGGAA AAAGCTTTCC TCAAAATACC TGGTGCAAGA AAAATGGGCT
ACTTTAAGGG TAGACACCTG TGAGCTGCAA AATGGAGCTA TAAAGGACGA CTATTATGTA
CTTGAATATC CAAACTGGGT AAATGCCATA GCACTCACGG AAGAAAATAA AGTAATCATG
GTACGTCAGT ACAGACATCC CGCCGATATT ATATCACTGG AAATACCTGG TGGTGTAATT
GATGGGGAAG AGCTCCCTGA AGCTGCCATA AAACGGGAAC TGCTGGAAGA AACCGGTTAT
TCTTTTAAAA GCGCAGAACT GATTGCAACA TTATATGCCA ACCCTGCAAC TGCAAATAAT
GTAACCTATA CCTATTTACT GAAGGGAGGC ACAAAAACTG CCGAGCAGCA TCTGGATGAT
CATGAAATCT TAAATGTGGA AGAATATACG ATTGAAGAGC TGAAGCAATT GCTTGCGGAG
CATAAAATAG ATCAGGCTTT ACATTGTGCC GCCTTGTTTT ACGGCTTAAT GAAGCTTGGG
CTTTAA
|
|---|
| Protein sequence | MEILKWKKLS SKYLVQEKWA TLRVDTCELQ NGAIKDDYYV LEYPNWVNAI ALTEENKVIM
VRQYRHPADI ISLEIPGGVI DGEELPEAAI KRELLEETGY SFKSAELIAT LYANPATANN
VTYTYLLKGG TKTAEQHLDD HEILNVEEYT IEELKQLLAE HKIDQALHCA ALFYGLMKLG
L
|
|---|
| |