Gene Phep_3601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3601 
Symbol 
ID8254732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4308914 
End bp4310455 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content46% 
IMG OID644937262 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003093854 
Protein GI255533482 
COG category[R] General function prediction only 
COG ID[COG2509] Uncharacterized FAD-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGG AAATAGAAAT TACAATGGCC CCGGAAAGTA TGGGGTCTGA AACTGCTGTT 
AAAGAAGCGC TGTCAGCGGC GCTTAAAGTC GATTTAGCAC GTATAAAGGG CTATAAGGTG
CTTAAACGCT CTATTGATGC ACGCTCCAGA AAAGTAATAT ATCGTTTGCA GGTAAAGGCA
TTTATTGATG AACCGGCTTT GGCAGATATT TTTACCATAA ACTATCAAAA TGTCAGTAAT
GCCAGGCCTG TGATTATTGT AGGTGCCGGG CCTGCCGGCC TTTTCGCTGC ACTGCAATGT
ATAGAGAACG GGTTAAAGCC CATAGTTTTG GAACGTGGCA AAGATGTGAA ACAACGCCGG
AGAGATCTGG CTGCCATTAA CAAAGAAGGC CTGGTTAACA CAGAATCTAA TTATTGTTAT
GGCGAAGGCG GTGCCGGAAC CTATTCGGAC GGAAAACTGT ATACCCGTTC CAATAAAAGG
GGCGACATCA ATAAAGTGCT GCAAATTTTT GTACAGCATG GGGCCACAGC TGATATACTG
GTAGATGCCA GGCCCCATAT CGGAACCAAT AAGCTGCCCC ATATCATCAC TGCCATCAGA
GAAACCATTT TAAATGCGGG TGGGGAAATG CATTTTGATC AGAAAGTAAC GGATTTGCTG
GTTAGTTTTG GGCAGATCAA AGGCGTAGTG GTTAATGGTA CGAACCGCTT GCTGGCCGAT
GCTGTTATCC TGGCTACGGG CCATTCTGCA CGTGATATAT ACGAATTGCT ACACCATAAA
GGCATTTTGG TTGAAGCCAA ACCATTTGCT TTGGGTGTTA GGATTGAGCA TCCACAGGCC
ATTATCGATG CTGCACAATA CCATTGTGAT GTTCGCAGTG AATTTTTGCC TCCGGCTTAT
TACAGTTTGG TAGAACAGGT AGGCAGCAGG GGAGTATTTT CTTTCTGCAT GTGCCCGGGG
GGTATTATAG CACCCTGTGC TACTTATAAA AACGAGATTG TGGTAAACGG CTGGTCGCCC
TCAAAGCGAA ACAATCCGTT TGCGAATTCA GGAACGGTGG TACAGATCAT GCTGGAGGAT
GTAAAAGGTG ACGATCCTTT ACGGATGATG CATTTCCAGG CCCGGCTGGA ACAAACTGCC
TTTAATTTGG GTGGTGGCAA GCTGGTTGCA CCTGCACAGC GGATGGTCGA CTTTGTAGAA
GGCCGTCTTT CGGCCGATCT TCCTAAAAAT TCATACCTTC CGGGAACAAA AAGTGCAATC
CTTAAAGATA CGCTGCCTGA TTTTGTTTCA TCGAGTTTAA AAAATGCCCT GCCTGTTTTT
GGGAAAAAGA TGAAAGGCTA TTATACCAAT GAAGCAATTT TAGTAGGTGT GGAAAGCAGA
AGCTCCTCTC CTGTGCGTAT TCCCCGAGAC CGGGAAACCT TTCAGCATCC TCAGGTTGCC
GGGCTATATC CCTGCGCAGA AGGTGCAGGC TATGCAGGCG GAATAGTTTC GGCGGCTATT
GATGGGGTAA ATTGTGCCAA CGCCGTACTC AGGACAGTTT AA
 
Protein sequence
MQKEIEITMA PESMGSETAV KEALSAALKV DLARIKGYKV LKRSIDARSR KVIYRLQVKA 
FIDEPALADI FTINYQNVSN ARPVIIVGAG PAGLFAALQC IENGLKPIVL ERGKDVKQRR
RDLAAINKEG LVNTESNYCY GEGGAGTYSD GKLYTRSNKR GDINKVLQIF VQHGATADIL
VDARPHIGTN KLPHIITAIR ETILNAGGEM HFDQKVTDLL VSFGQIKGVV VNGTNRLLAD
AVILATGHSA RDIYELLHHK GILVEAKPFA LGVRIEHPQA IIDAAQYHCD VRSEFLPPAY
YSLVEQVGSR GVFSFCMCPG GIIAPCATYK NEIVVNGWSP SKRNNPFANS GTVVQIMLED
VKGDDPLRMM HFQARLEQTA FNLGGGKLVA PAQRMVDFVE GRLSADLPKN SYLPGTKSAI
LKDTLPDFVS SSLKNALPVF GKKMKGYYTN EAILVGVESR SSSPVRIPRD RETFQHPQVA
GLYPCAEGAG YAGGIVSAAI DGVNCANAVL RTV