| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3559 |
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| Symbol | |
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| ID | 8254680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4232986 |
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| End bp | 4233987 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937210 |
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| Product | metalloendopeptidase, glycoprotease family |
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| Protein accession | YP_003093812 |
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| Protein GI | 255533440 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.700407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.724049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCTGTAA TACTTGCTAT AGAATCTTCT TGCGATGAAA CTTCAGTTGC TATATGTAAC
AACGGCAAAA TTACTGCCAA TGTTATTGCA AACCAAACAA TTCATGAAAA TTATGGTGGC
GTAATACCTG AACTTGCATC AAGGGTACAT CAACAAAATA TCGTTCCGGT TATACAACAG
GCATTAACTG ATGCTAAAGT AAGCAAAAAG GAATTAAGTG CCGTTGCATT TACCAGGGGA
CCAGGTCTTT TGGGGTCATT GCTGGTTGGT GTTTCATTTG CCAAATCATT TGCTTTGGCG
CTTGATTTGC CCTTAATAGC CGTTAACCAC ATGCATGCAC ACATTCTGGC ACATTTTATT
GATGATCCCA AACCTGCATT TCCTTTTTTA TGCCTTACGG TTTCGGGAGG GCATACCCAG
ATTGTATTGA TTAGGAGTTA TTTTGACATG GAGATCGTGG GGGAAACTCT TGATGATGCT
GCTGGCGAGG CTTTTGACAA GACTGCCAAA ATCCTGAATC TTCCTTATCC GGGCGGACCA
CTGATAGATA AACATGCAAA AGAAGGAAAT CCGCTGGCCT TTAAGTTCCC TGAACCTCAG
ATAAAAGATT TAAATTACAG TTTTAGTGGC TTAAAGACTG CTATCTTGTA TTTTATCAGG
GCGCAGGAAA AAGAAAATCC TGATTTTATT GCCGGCAATT TAAATGATAT CTGCGCATCT
GTACAACATA GTATTGTTGA CATTTTGCTC AATAAATTAA AAAAGGCGGC CCAGCAATAT
GGAATAAAAG AAATTGCAAT AGCCGGTGGG GTTTCGGCAA ACAGTGGCCT GCGGCATGCA
CTTCAAAAAA TGGCGGGACA GCAGGGTTGG AATGTTTATA TCCCCGCATT TCAGTATTGC
ACAGATAATG CTGCTATGAT TGCCATTGCA GGATATCATA AATATTTAAA CGGTGATTTT
GTTGGCCAGG ATGTGGCTCC ACTTTCACGA ATGGAATTTT AA
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| Protein sequence | MSVILAIESS CDETSVAICN NGKITANVIA NQTIHENYGG VIPELASRVH QQNIVPVIQQ
ALTDAKVSKK ELSAVAFTRG PGLLGSLLVG VSFAKSFALA LDLPLIAVNH MHAHILAHFI
DDPKPAFPFL CLTVSGGHTQ IVLIRSYFDM EIVGETLDDA AGEAFDKTAK ILNLPYPGGP
LIDKHAKEGN PLAFKFPEPQ IKDLNYSFSG LKTAILYFIR AQEKENPDFI AGNLNDICAS
VQHSIVDILL NKLKKAAQQY GIKEIAIAGG VSANSGLRHA LQKMAGQQGW NVYIPAFQYC
TDNAAMIAIA GYHKYLNGDF VGQDVAPLSR MEF
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