Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3490 |
Symbol | |
ID | 8254610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4154002 |
End bp | 4155906 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644937140 |
Product | hypothetical protein |
Protein accession | YP_003093743 |
Protein GI | 255533371 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTGA GGATAAACAA CAATGCAAAG ATAATTTTTG TCATTTTATT TTTATTGATT ACTTCAGGTA ATTTACATGC GCAAAAGGAC CCTTATCAAA CTACATTACA GTCTTTATGT GATGTATTAC TTACCACGCA GATCAACGGA CCAACTGATC CAAACTTTGG TGCCCTGGTT TGTCCCTCAC TAAATCCGGA AAACCACCCC ATACACTCGC GTGCAGCAGA GGCCGTATAT CCTTTTGCAA TTGCCTATAA GCTTACCAAG GAAGTCCGAT ATCGTGATGC AGCTATTAAA TTGGGCAACT GGCTGATAAA AATCCAACAA ACCGAAGGCA AAAACACAGG GGGCTGGAGT GAAAGCTGGC CCGATCCGGA ACAAAAAGGC TGGCATGGAA CAACCACCGA TCAATTGATC TCACTGGCTG GTGCATATGC TATTTTGAAA CCCTGGCTTA GTGCTGCCGA AATTGAAAAA TGGAACCAAT CCATGAGTAT GGCTGCTGAT TATATTGTTG CAACCTTTCC CATTGGAAAT ATCAATTATA ATCCCACTGG CGCTGCCACT TTATTGTACA CCTACAAAGT TGCCAGTAAG CCCAAACAGC GCTGGTTGAT AAAGGCCGAT TCCTTAATGC ATACCAGCAC TTTAAACTAC GTTACCGCTG ATAATTTTTT GAGCGGTGAG GGCAAGGGCG TAGATGAAGG ATACAATATG GCCCAAAGCA TCGGTTATAT TGCACTTTAT GCCATTTTGA AAAACGATTT GCAGATTAAA CAAATTGCCG CCAATTTACT TAAAACACAT GCACTATTTG TATATCCCAA TGGATCTATT GATAACTCGT GGGGTACACG ATCGTTCAAA TGGAATTATG AAAGCGGAAC AAAAACTGCT CCTGGCGTAT ATTTCAGTTT CGCTTTGCTG GCCGATATGG ACCCGGAATT TGGAGCTGCA GGATTAAAAT GCCTGGACTA TTTAAATACA AGGGCGATGC AGGATGGCTG GATTGGTTAT GGTCCGCATG CCGCAGAACA TGCCAGCAGT TCTCCACCCT GCAATTATTC TACTTTTGCC AGAGCCCAGA GTATTGCATT GGCCATTGAA TATGGGCCAA AAACAAAAAT ACAGGCTAAA TCCCCCTCGT CCAGTCAAGA CCACAACTGG TATAAATTTT TCCCGGACAT GAAAGTAGCT GTTATCCGTA CTGCTAAAAT GATGGCTACG GTATCTGCTT ATGGAGAAAT AAGAAGGTAC CCACGCGAAT CTGTATGCCG GGGTGGCAGC ATTACAAACC TGTGGTACGA TGGATTTGGT ACAAATGGTT TTATGCAATC TTCATCTTCT TCATCGTACC AGAGGATTGA AGAGTTACAT ATGCCTATTG AAAAGGACCT GTTGTCATTA ACACCGAGGG TTGGGTTTAC AAAGGACACC ACTTACTACT CCAATATATT TGAGGCAGAT GCCAGAATGA ATGTATTGAA GGAATCTGAT CATGTTAAAG TAGTAGCTGC TGGTTATATG CAAACGATTA AAGGCGTAAA ATCTAATACC AGCTACAATT TAACACAAGG GTTTTATGAG GGGTATCTCA CAAAAGAGTT TACAGTTACG GGAGAAAGTC AAAAATATAG CATTGTTGAG CCTATTGTAA AAGATAAAGG GACTACTTTT AAGCTGAAAA ACGACAGTAC CGTAGTGATA AAAACAGCTG CTTCAGATGC TGAATGGGAA TTAAGCGTGA TAAGCAGCAC CATTCCCTAT AAAATAACAC TTGGCGCAAA TGCAGACAAA TACTGGTCTC CATTTCCAGG GGTAAATGCT TATCCGGTTG TGATCAGTTT CAACACGGTT TCAGCTGCAC CTCAAACTTT AAAAATATTT CTTGGTAAAA AATAA
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Protein sequence | MSLRINNNAK IIFVILFLLI TSGNLHAQKD PYQTTLQSLC DVLLTTQING PTDPNFGALV CPSLNPENHP IHSRAAEAVY PFAIAYKLTK EVRYRDAAIK LGNWLIKIQQ TEGKNTGGWS ESWPDPEQKG WHGTTTDQLI SLAGAYAILK PWLSAAEIEK WNQSMSMAAD YIVATFPIGN INYNPTGAAT LLYTYKVASK PKQRWLIKAD SLMHTSTLNY VTADNFLSGE GKGVDEGYNM AQSIGYIALY AILKNDLQIK QIAANLLKTH ALFVYPNGSI DNSWGTRSFK WNYESGTKTA PGVYFSFALL ADMDPEFGAA GLKCLDYLNT RAMQDGWIGY GPHAAEHASS SPPCNYSTFA RAQSIALAIE YGPKTKIQAK SPSSSQDHNW YKFFPDMKVA VIRTAKMMAT VSAYGEIRRY PRESVCRGGS ITNLWYDGFG TNGFMQSSSS SSYQRIEELH MPIEKDLLSL TPRVGFTKDT TYYSNIFEAD ARMNVLKESD HVKVVAAGYM QTIKGVKSNT SYNLTQGFYE GYLTKEFTVT GESQKYSIVE PIVKDKGTTF KLKNDSTVVI KTAASDAEWE LSVISSTIPY KITLGANADK YWSPFPGVNA YPVVISFNTV SAAPQTLKIF LGKK
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