Gene Phep_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3490 
Symbol 
ID8254610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4154002 
End bp4155906 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content41% 
IMG OID644937140 
Producthypothetical protein 
Protein accessionYP_003093743 
Protein GI255533371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGA GGATAAACAA CAATGCAAAG ATAATTTTTG TCATTTTATT TTTATTGATT 
ACTTCAGGTA ATTTACATGC GCAAAAGGAC CCTTATCAAA CTACATTACA GTCTTTATGT
GATGTATTAC TTACCACGCA GATCAACGGA CCAACTGATC CAAACTTTGG TGCCCTGGTT
TGTCCCTCAC TAAATCCGGA AAACCACCCC ATACACTCGC GTGCAGCAGA GGCCGTATAT
CCTTTTGCAA TTGCCTATAA GCTTACCAAG GAAGTCCGAT ATCGTGATGC AGCTATTAAA
TTGGGCAACT GGCTGATAAA AATCCAACAA ACCGAAGGCA AAAACACAGG GGGCTGGAGT
GAAAGCTGGC CCGATCCGGA ACAAAAAGGC TGGCATGGAA CAACCACCGA TCAATTGATC
TCACTGGCTG GTGCATATGC TATTTTGAAA CCCTGGCTTA GTGCTGCCGA AATTGAAAAA
TGGAACCAAT CCATGAGTAT GGCTGCTGAT TATATTGTTG CAACCTTTCC CATTGGAAAT
ATCAATTATA ATCCCACTGG CGCTGCCACT TTATTGTACA CCTACAAAGT TGCCAGTAAG
CCCAAACAGC GCTGGTTGAT AAAGGCCGAT TCCTTAATGC ATACCAGCAC TTTAAACTAC
GTTACCGCTG ATAATTTTTT GAGCGGTGAG GGCAAGGGCG TAGATGAAGG ATACAATATG
GCCCAAAGCA TCGGTTATAT TGCACTTTAT GCCATTTTGA AAAACGATTT GCAGATTAAA
CAAATTGCCG CCAATTTACT TAAAACACAT GCACTATTTG TATATCCCAA TGGATCTATT
GATAACTCGT GGGGTACACG ATCGTTCAAA TGGAATTATG AAAGCGGAAC AAAAACTGCT
CCTGGCGTAT ATTTCAGTTT CGCTTTGCTG GCCGATATGG ACCCGGAATT TGGAGCTGCA
GGATTAAAAT GCCTGGACTA TTTAAATACA AGGGCGATGC AGGATGGCTG GATTGGTTAT
GGTCCGCATG CCGCAGAACA TGCCAGCAGT TCTCCACCCT GCAATTATTC TACTTTTGCC
AGAGCCCAGA GTATTGCATT GGCCATTGAA TATGGGCCAA AAACAAAAAT ACAGGCTAAA
TCCCCCTCGT CCAGTCAAGA CCACAACTGG TATAAATTTT TCCCGGACAT GAAAGTAGCT
GTTATCCGTA CTGCTAAAAT GATGGCTACG GTATCTGCTT ATGGAGAAAT AAGAAGGTAC
CCACGCGAAT CTGTATGCCG GGGTGGCAGC ATTACAAACC TGTGGTACGA TGGATTTGGT
ACAAATGGTT TTATGCAATC TTCATCTTCT TCATCGTACC AGAGGATTGA AGAGTTACAT
ATGCCTATTG AAAAGGACCT GTTGTCATTA ACACCGAGGG TTGGGTTTAC AAAGGACACC
ACTTACTACT CCAATATATT TGAGGCAGAT GCCAGAATGA ATGTATTGAA GGAATCTGAT
CATGTTAAAG TAGTAGCTGC TGGTTATATG CAAACGATTA AAGGCGTAAA ATCTAATACC
AGCTACAATT TAACACAAGG GTTTTATGAG GGGTATCTCA CAAAAGAGTT TACAGTTACG
GGAGAAAGTC AAAAATATAG CATTGTTGAG CCTATTGTAA AAGATAAAGG GACTACTTTT
AAGCTGAAAA ACGACAGTAC CGTAGTGATA AAAACAGCTG CTTCAGATGC TGAATGGGAA
TTAAGCGTGA TAAGCAGCAC CATTCCCTAT AAAATAACAC TTGGCGCAAA TGCAGACAAA
TACTGGTCTC CATTTCCAGG GGTAAATGCT TATCCGGTTG TGATCAGTTT CAACACGGTT
TCAGCTGCAC CTCAAACTTT AAAAATATTT CTTGGTAAAA AATAA
 
Protein sequence
MSLRINNNAK IIFVILFLLI TSGNLHAQKD PYQTTLQSLC DVLLTTQING PTDPNFGALV 
CPSLNPENHP IHSRAAEAVY PFAIAYKLTK EVRYRDAAIK LGNWLIKIQQ TEGKNTGGWS
ESWPDPEQKG WHGTTTDQLI SLAGAYAILK PWLSAAEIEK WNQSMSMAAD YIVATFPIGN
INYNPTGAAT LLYTYKVASK PKQRWLIKAD SLMHTSTLNY VTADNFLSGE GKGVDEGYNM
AQSIGYIALY AILKNDLQIK QIAANLLKTH ALFVYPNGSI DNSWGTRSFK WNYESGTKTA
PGVYFSFALL ADMDPEFGAA GLKCLDYLNT RAMQDGWIGY GPHAAEHASS SPPCNYSTFA
RAQSIALAIE YGPKTKIQAK SPSSSQDHNW YKFFPDMKVA VIRTAKMMAT VSAYGEIRRY
PRESVCRGGS ITNLWYDGFG TNGFMQSSSS SSYQRIEELH MPIEKDLLSL TPRVGFTKDT
TYYSNIFEAD ARMNVLKESD HVKVVAAGYM QTIKGVKSNT SYNLTQGFYE GYLTKEFTVT
GESQKYSIVE PIVKDKGTTF KLKNDSTVVI KTAASDAEWE LSVISSTIPY KITLGANADK
YWSPFPGVNA YPVVISFNTV SAAPQTLKIF LGKK