Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3399 |
Symbol | |
ID | 8254518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4043459 |
End bp | 4045300 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644937051 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_003093655 |
Protein GI | 255533283 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGGT ATTTCCTTTT TTTAATCCTA TCGGTTCCGC TGTCGGTCTG TTCGCAAAGT CAGACCGGCT TGTTAAAAGT AATTCCGGCA CCTGCAGCAG TTAAGCTTAG TGGCGGCAGT TTCAGGCTTT CTCCACAAAC AAAGCTGGGC TATACAGACC AAGCTGGTAA AAAGACTGCG ACCCTCTTAC AAGATTACCT GAAGAAGAAT TATGGGCTGC AGCTTTCCTT TAAACCAGGC GTGACGAAGC TCAGCAACGC AGTGATTTCC TTTGTTAAAA CACAGGAAAT GGCAGCAGAG GCGTACACCT TATTGTCAAA TACTCGGGGG GTTGAGATCA GGGGTGATGA AGCTGGGTTA TTCTATGGAC TGCAAACGCT CCTGCAAATG ATAGAAAATA CCGGGAACGG ACTAATGGTC ACAGGTGCCG AGATTAAGGA CCAGCCCAGG TATGCTTTCC GGGGAATCAT GCAGGATGTG GGGTACCACA TTTATCCTGT CTCCTTTATC AAAAGCCAGA TTGATATGCT GGCAAAATAT AAAATGAATG TCTACCATTG GCACCTGACC GAAGACCATG GCTGGCGGAT AGAGATTAAA AAATATCCAA AGTTGACTAC TGTGGGTGCT TTTCGGGAAA GTACGCAGAT CAGTCATTAT GCAGATTCAC TCAATGGCCA GGATCACCTG CCTTATGGGG GTTTTTACAC CCAGCAGGAG ATCAAAGAAA TTGTAGCTTA TGCCCGCGAA AGGCAAGTTA CAGTAATCCC CGAGATTGAA CTGCCAGGGC ATTCTCTGGC GGCCCTGGCC GCTTACCCCG AACTTGCCTG TGGTGATCAA CCCGGTCCTT TTAAAGTGGC ACAAAGTTGG GGGATATTTG AAGATGTTTA TTGCGCAGGC AAAGAGCAGA CTTTCCAGGT GCTGGAAGAT GTGCTTACCG AAGTGATGGC ATTATTCCCT TCCAGGTATA TCCACATCGG CGGCGATGAA TGTCCGAAAA AACGCTGGGA AAAATGCCGG TATTGCCAGA AACGGATCAA AGATGAAAAA TTAAAGAACG AATTTGAGTT GCAAAGTTAT TTTGTAAAAC GCATCGAGCG TTTCGTAAAC AGCAAGGGCA GACAAATTAT AGGTTGGGAT GAGATCCGTG AAGGTGGATT GGCGCCAAAT GCTACAGTGA TGGCCTGGCG CAGCATAGAA GAAGGCATCA AAGCAGCGCA GGAAAACCAC GATGTAGTGA TGGCACCAAT GTCACATGTA TACTTCGATT TTTTACAAGG GCCAAGGCCA TTAGAACCCC TGGCGATCGG ATGGGGATTT AACCCTGCTG AGCGCATATA TGCTTACGAT CCTACACCTT CATCCCTTAC CGCTGCGCAA AAGAAACACA TCATCGGTGT AGAAGCGCCC ATCTGGACGG AACATATGGA TACTTACCGT AAGGTAGAAT ACATGCTTTA TCCGCGATTA ATGGCCTTGG CAGAAATCGC CTGGACACCG CTGGAACGTA AAAATGCCAT AGATTTTTTT GAAAGCAGGC TGCCCAGACA TCTGGCTGTA CTCGACCGCT CAAAGATCCT GTACCGGGTT CCCGGACCAA TTGGGATAAC CGACACCACC TTGAACGGTC GTAATTTTAA GGTTACGTTG AAGCCTTCTG TTGAAGGGGG AAAAATTTAT TATAATTTTG AGGGCCAGGA TGCCCGGGAA ACAGATTACC TGTACGAAAA GCCAATTGAC ATTATCTTGC ACAAAGGCGA GAAACGCCAG ATGAAATCAG TTGTTGTGGC GCCTTCTGGC AAAAGGAGTA TCAGCACAAC CACATTATTC AGTTATCAAT AA
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Protein sequence | MLRYFLFLIL SVPLSVCSQS QTGLLKVIPA PAAVKLSGGS FRLSPQTKLG YTDQAGKKTA TLLQDYLKKN YGLQLSFKPG VTKLSNAVIS FVKTQEMAAE AYTLLSNTRG VEIRGDEAGL FYGLQTLLQM IENTGNGLMV TGAEIKDQPR YAFRGIMQDV GYHIYPVSFI KSQIDMLAKY KMNVYHWHLT EDHGWRIEIK KYPKLTTVGA FRESTQISHY ADSLNGQDHL PYGGFYTQQE IKEIVAYARE RQVTVIPEIE LPGHSLAALA AYPELACGDQ PGPFKVAQSW GIFEDVYCAG KEQTFQVLED VLTEVMALFP SRYIHIGGDE CPKKRWEKCR YCQKRIKDEK LKNEFELQSY FVKRIERFVN SKGRQIIGWD EIREGGLAPN ATVMAWRSIE EGIKAAQENH DVVMAPMSHV YFDFLQGPRP LEPLAIGWGF NPAERIYAYD PTPSSLTAAQ KKHIIGVEAP IWTEHMDTYR KVEYMLYPRL MALAEIAWTP LERKNAIDFF ESRLPRHLAV LDRSKILYRV PGPIGITDTT LNGRNFKVTL KPSVEGGKIY YNFEGQDARE TDYLYEKPID IILHKGEKRQ MKSVVVAPSG KRSISTTTLF SYQ
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