| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3385 |
|---|
| Symbol | |
|---|
| ID | 8254504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4025928 |
|---|
| End bp | 4027475 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644937037 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003093641 |
|---|
| Protein GI | 255533269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.680608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TTAACAAAAT AACTGCCATT GCACTGTTCT CGCTTACTGC CTTTCTTTCC
TGCAGTGACG ATAAGCTGGC AGACATCAAC ATAGATCCGA ACAGGCCAGC CAATGTGCCT
ACCCCAACAC TGATCTTATC GGCCGAGAAA CAGATCATGG ACAACATCAG GAACCTTGAT
TTTTCTCTGA ACGGTGCCAT GCTGTTTGCA CAGTATTACA GTCAGAACAT TTACACAGAC
CAGAGCCGTT ACGATGTACC GCGGAATTAT TCTGACCGTT ACTGGGCTGA TGGATTTAAG
GCCCTGAACA ACCTCAACGA GATCATCAAG CTGAATACCA ATCCGGCTAC CAAAGGCTTT
GCCTCGGCCG GAACGGTTGC CGGTACCAAT GCCAACCAGA TTGCGGTATG CAGGGTATTA
AAAGCTTTTA CATTTCATTC GCTAAGCGAT GTGTTTGGCG ACATCCCTTA TCAGTCTTAC
GCCGGCAAGG ATCCTTCTTT TGAAGCTTTG CAACAGAACC CTGATAATTA TACCCCTAAA
TATGCCAGCC AGGAAAAGAT CTATACCGAT CTGCTCCAGG AACTGGACCA GGCTGCCGAT
ACTTTATGGA AATATTCGAC AGCCAATACT TTTGGTGTTT CGGATGTGAT CTATAAAGGG
AACAATGAAC ATTGGGCAAG GTTTGCCAAC TCTTTGCGTC TGCGTTTGGC AACAAGGATC
AGGACCAAAT TACCGGCGCT TTCACAGCAG CATTTTACAG ATGCGCTGGC GCAGGGCGTA
TTTACTTCAA ACCTGCACAC TGCTGCCTTT AAATACAGCA TTGCCGCGCC AAATGAGGCC
CCGCTTTTCA GGGCCACAGT TACGGCCAAC CGCAAGGATT TTGCCGTATC ACATATCCTC
ATCAATTCTT TAAAAGGAGA ACTGGGGCCT TTTACAACTG TCGATCCGCG TTTACCGGTC
TATGCACTGC CCAATAAGAA CAACCAGTAT ATTGGCCAGC CTTATGGCCT GCCACTTGAA
GCGGCGGGTA TCAACGAGCC AACAGACATC AGCTTGCCCG GTGCTTTGGT AAATGCAGCC
GATTTTAGCG AAGTGCTTCA GGAATATGCT GAAGTAGCTT TTTTAATTTC GGAATACCAG
AACTGGAGCG ACAGCGAGTA CAAAAAGGGT GTTGTGGCTT CGTTGACACG CTGGGGCATA
GCCGAACCGG CAGCACAAAC CTATGCCAAT AACCTGCCTG CTGCCACTAA AGAAAGGGTG
CTTACCCAAA AATACTTTGC ACTCTATACC CAGGGGCTTG AAGCCTGGTC GGAAATCCGC
CGTACTGGTT TCCCTTTGTT CCTGGTAAAA CCAAACGATG TGGTGTGGAC CAGGGTAACG
CCTGCAGGCA CTTCAGTATA TACATTTAAG CCTATTTTTG GCAACGGGAT CCCTAAACGC
CTTTATTATC CTGTAAAAGA ACAAAGTGTA AATAAAACCA ATTACCAGCA GGCACTGGCT
TCGCAGGGCG ATGATGTGAT CACTACTGCA CTTTGGTGGA ACAAATAA
|
|---|
| Protein sequence | MNFFNKITAI ALFSLTAFLS CSDDKLADIN IDPNRPANVP TPTLILSAEK QIMDNIRNLD
FSLNGAMLFA QYYSQNIYTD QSRYDVPRNY SDRYWADGFK ALNNLNEIIK LNTNPATKGF
ASAGTVAGTN ANQIAVCRVL KAFTFHSLSD VFGDIPYQSY AGKDPSFEAL QQNPDNYTPK
YASQEKIYTD LLQELDQAAD TLWKYSTANT FGVSDVIYKG NNEHWARFAN SLRLRLATRI
RTKLPALSQQ HFTDALAQGV FTSNLHTAAF KYSIAAPNEA PLFRATVTAN RKDFAVSHIL
INSLKGELGP FTTVDPRLPV YALPNKNNQY IGQPYGLPLE AAGINEPTDI SLPGALVNAA
DFSEVLQEYA EVAFLISEYQ NWSDSEYKKG VVASLTRWGI AEPAAQTYAN NLPAATKERV
LTQKYFALYT QGLEAWSEIR RTGFPLFLVK PNDVVWTRVT PAGTSVYTFK PIFGNGIPKR
LYYPVKEQSV NKTNYQQALA SQGDDVITTA LWWNK
|
|---|
| |