| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3384 |
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| Symbol | |
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| ID | 8254503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4022410 |
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| End bp | 4025910 |
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| Gene Length | 3501 bp |
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| Protein Length | 1166 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937036 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003093640 |
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| Protein GI | 255533268 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.880161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTTT ACCTAAACGT TAAACGTGGT GGAAACCACA GTATTAAACG AAAACTCATC
ATGCGGATCA ACTTATCCAT ATTTTTCATC TTACTGGCCA TGATACAGGT ATCTGCCAGA
GAGGTTTTCG CACAAAAAAT TACGCTGGAC AGAACCAACA GCAGTTTAAA CCAGTTGATA
AAAGATATCC GTTCGCAAAG CGGATACGAT TTCTTTTATA ACAATGCCGT TATTGTAAAA
GCCAGACCGG TTTCTATCCA TGTCAAAAAT GTATCACTGG ATGAAGCCCT GCAGAAATGC
TTTGCCAACC AGTCCCTTAC TTACCGGATC ACTGACAAAA TGGTGGTAAT CATGGAAAAA
GAAAACCATG AAGCTGCACC TGCCGTTCAG CAAAGTGTTA CCGGAAAAGT GGTAGACAGC
CTGGGCATGC CACTTCCTGG TGCCACCATC AGGGTTAAAG GCAGCAGCAG GGTTACCCTT
ACTGATGCTA AAGGGGTGTT TGTTTTAAAA GACATTGCCG ATAATGCATT GCTGGAAATT
TCTTACCTGG GTTTTGTAAG CCGCGAAATC AAAGCTTCTC CTAATATGGG CAACATTGTA
TTACGTGCTT CACAGTCGGG ATTAAACGAG ATCGTTGTAA CAGCCATGGG CATTTCCAGA
GAAAAGAAGG CATTGGGATA TGCCGTGCAG GATGTAAAAT CTGAAGAACT AACTACCCGT
CCGACCAATG CACTGAGTGC CATTTCCGGA AAAGTTGCCG GTTTACAGGT CATCTCCTCT
GGTGGAAATA TGGGCGGTTC CACCCGTGTA TTGCTGCGTG GTATCAATTC CATTATGGGC
AATAACCAGC CCCTGTATGT AATTGACGGA ACACCAATTG ACAATTCAGA CATCAATACT
ACCTCTACCA TAGATGGAAG CGCCGGTAAG GATGTAGGAA ACCTGATCCA GGACCTGAAC
CCGGATGATA TAGAAAATAT TTCTGTATTG AAAGGCCCAT CTGCTGCTGC CATATACGGA
TCCAGGGCCG CAAATGGTGT AATCCTGGTA ACCACTAAAA AAGGGAGCAA AAAAGAAAAA
TTCGACATTA CCCTGAATAC AGGTGTTGAT TTGGAAAATG TTGTACGCTT GCCTGCCAGA
CAGCACCTGT ATGGTCAGGG TTATGCCACA ACCTTTGCCA AGGCCACAAT TGCAGGTAAA
GAATATAACA TTGTAGATTA TGCTTCGGAT GAAAGCTGGG GTCCAAAACT GGACGGCACG
CCGGTATTGC ACTGGTATAA CCTGGATCCT GAATATCCCG CCGATTACCT GAACCCGCAG
CCATGGGTAT ACCCGGAACA TGATGTGAAC TACTTTTTCC GTACCGGAAT AGCGAATACC
AATAACATTG CCATTAGCGG GGCCAGCGAC AAGACTACCT ATCGCTTATC CTATACCAAT
AAAAATGTAC GGGGCACCGT GCCAAATTCC AGTTTAGGCC GTAATGCCGT CAACTTTTCG
GGTTCAACCC AACTGGGCAT CGTAAATGTG TTCAGCAACC TGAATTACAT TAAAAATACT
TCGCTGGGCA GGCCATGGAC CGGCGCTTCT AACCGGAACA TTATGCTCGA GGCCTTCCAA
TGGGGTGGTG TGCAGGTAGA TTATAAAAAA CTAAGTGAAT ACAAAAGGCC ATCAGATGGC
ACACCCCGCG CCTGGAACAG GAGCAGTTAC CTGAATACAC CTGCAGGCAA GGCTACCCGC
TTTATCGATA ATCCATACTG GTCGGCCTAT GAAAGCTATC TGGAAGAGAA TCGCGACAGG
CTTTACGGAA ACATCGGCTT TACAGTAGAT GCCAATAACT GGCTTAAACT AACCGGTAAA
GTACATGCCG ACATCTATAC TTTTGAGTAC CAGGACCGCA TAGCGGTATA TTCACGTTCG
CAATCGCAGT ATCAGGAATA CAATAACCAC TTTAATGAAT TTAACTATGA GTTTTTGGCT
ACAGCCAAAA AAAACTGGGA TGATTTCTCA TTGTCGGGAA ATGTTGGCGG AAACATCAGG
GACCAGAAAC GCAGGGTAAT TGACGGATTG ACCCAGGGCG GACTCATTGT ACCGCTGTTC
TATAATCTTA AAAATGCACC TAACGTTTTG AACAACAATA ATTTTTACCA CAGACAGGTT
TATTCGTTGT ATGGCAGCTT CTCGGCCGGA TGGAAAGGCA TGCTGTACCT GGACGGAACT
TTGCGCAACG ACTGGTCTTC TACCCTTCCG GTGAACAACA ATTCTTTCAT TTACCCTTCT
GTGACCGGAA GTTTTGTGAT CAGCGAACTG GCAGGTATTA AAAAACAGGA ATGGCTTGAT
TTTGCAAAAG TGCGCCTGGG CTGGGCACAG GTTGGTAATG ATACCGATCC TTATCAGCTT
TATCCGGTTT TTGAAGCACA GCAATCATTC AATTCCAATC CTTCTTACCG CCTTCCCGGC
ACCTTAAATA ACCCTGACCT GAAACCGGAG ATCACCTCTT CTGTAGAAGC CGGATTAAAT
GTACAGCTGT TTAAAAACCG CCTGGGTTTT GATATCACCT ATTACAACAA CAACAGCCGC
AACCAGATCC TGCCGGTTCC GGTATCTGCA GCCTTTGGTT ACGATAAAAA AGTACTCAAT
GCAGGTAAAA TAAATAACAA AGGACTTGAA GTTACCTTAA ATGGTACACC CGTTAAAAGC
ACTAATTTTG AGTGGAACAG TACCATCAAC TGGTCGCGAA ACAGAAATAA GGTAGTTTCG
CTGGACAGGG GTGTAAATAC CCTGGAACTG AGCAATCTGC TGGTAACCCT TGTGGCCCAG
GAAGGCAAGC CTTACGGACA GATCATGGGT TACGATTTTG TATATGCCCC CGACGGACAG
CGTGTGGTAC AGGCAGATGG CACTTATCTT AAAACCTCGC AGCTGGTACC ATTGGGCAGT
GTACTGCCCG ATTACCTGTT TGGTTTTCAA AATACCTTCC GCTATAAAAA ATTGCGCATG
GGCTTCCTGA TCGATGGCCG GATGGGTGGC AGCTTCTTCT CCCAAACCTA TAAAGTAGGG
ATGTATTCGG GAGTTTTAGA CCGTACTGCT GCAAATGGCA TCAGGGAAAC CGGCACTGTT
GTAGACGGAG TTAAGGCCAA TGTGGTCTTC CATCCGGACG GGACTTATAC TGTAAGCAAT
ACCAGCAAAA ATGAAACCCG TATTTCGGCT TTAAACTGGG CAAGAAATGA GTACAATGGC
CCAACCACTT TTAGTGTGTT CGATGCCTCC TATATCAAAT TAAGGGAAGT TACCTTGGGC
TATAATTTCG ACCTTAAAAA GACCGGGACC ATTCGTTCTG TAGGGCTTAC GCTATATGGA
AGAAACCTTT GGAACATTTA CACCAAAAGC AAATACATTG ATCCGGAATT TACAAACAGC
AGCGGTAATG TACAGGGTAT CGAAGGTGGT AACATCCCGG TTCCGGTTAC TTATGGTTTA
AATGTAAGTG TTAAGTTTTA A
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| Protein sequence | MIFYLNVKRG GNHSIKRKLI MRINLSIFFI LLAMIQVSAR EVFAQKITLD RTNSSLNQLI
KDIRSQSGYD FFYNNAVIVK ARPVSIHVKN VSLDEALQKC FANQSLTYRI TDKMVVIMEK
ENHEAAPAVQ QSVTGKVVDS LGMPLPGATI RVKGSSRVTL TDAKGVFVLK DIADNALLEI
SYLGFVSREI KASPNMGNIV LRASQSGLNE IVVTAMGISR EKKALGYAVQ DVKSEELTTR
PTNALSAISG KVAGLQVISS GGNMGGSTRV LLRGINSIMG NNQPLYVIDG TPIDNSDINT
TSTIDGSAGK DVGNLIQDLN PDDIENISVL KGPSAAAIYG SRAANGVILV TTKKGSKKEK
FDITLNTGVD LENVVRLPAR QHLYGQGYAT TFAKATIAGK EYNIVDYASD ESWGPKLDGT
PVLHWYNLDP EYPADYLNPQ PWVYPEHDVN YFFRTGIANT NNIAISGASD KTTYRLSYTN
KNVRGTVPNS SLGRNAVNFS GSTQLGIVNV FSNLNYIKNT SLGRPWTGAS NRNIMLEAFQ
WGGVQVDYKK LSEYKRPSDG TPRAWNRSSY LNTPAGKATR FIDNPYWSAY ESYLEENRDR
LYGNIGFTVD ANNWLKLTGK VHADIYTFEY QDRIAVYSRS QSQYQEYNNH FNEFNYEFLA
TAKKNWDDFS LSGNVGGNIR DQKRRVIDGL TQGGLIVPLF YNLKNAPNVL NNNNFYHRQV
YSLYGSFSAG WKGMLYLDGT LRNDWSSTLP VNNNSFIYPS VTGSFVISEL AGIKKQEWLD
FAKVRLGWAQ VGNDTDPYQL YPVFEAQQSF NSNPSYRLPG TLNNPDLKPE ITSSVEAGLN
VQLFKNRLGF DITYYNNNSR NQILPVPVSA AFGYDKKVLN AGKINNKGLE VTLNGTPVKS
TNFEWNSTIN WSRNRNKVVS LDRGVNTLEL SNLLVTLVAQ EGKPYGQIMG YDFVYAPDGQ
RVVQADGTYL KTSQLVPLGS VLPDYLFGFQ NTFRYKKLRM GFLIDGRMGG SFFSQTYKVG
MYSGVLDRTA ANGIRETGTV VDGVKANVVF HPDGTYTVSN TSKNETRISA LNWARNEYNG
PTTFSVFDAS YIKLREVTLG YNFDLKKTGT IRSVGLTLYG RNLWNIYTKS KYIDPEFTNS
SGNVQGIEGG NIPVPVTYGL NVSVKF
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