| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3382 |
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| Symbol | |
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| ID | 8254501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4020487 |
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| End bp | 4021065 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937034 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003093638 |
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| Protein GI | 255533266 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGAT ACAACAGTAT AAGTGATCAC GAACTAATTG CCCAGCTAAA AAGGGGCAAC
CGCGATGCTT TTACTGAAAT ATATGACAGG TATTTCTGGC AGCTTCACGC GCATGCTTAC
AAATGGATGC GGAACCGTGA AGAAACCAGG GACATTATCC ACGAACTCTT TTTAACGCTT
TGGGAAAAAC GAGAAACCTT ATCTTTTGAG CATGGTCTGC TCAGTTACCT TTCGGCCGCT
GTAAGGAACC GCATTTTTAA TTTACTGGCA CATAAACGTA TAGAATCAAA ATATCTCAGC
TCGCTTGATG ATTTCATCAA TGAAGGGATC TGCATCACCG ATCACCTGAT CAGGGAGAAA
CAACTTACCT CACTCATTGA AAATGAAATT TCCGGTATGC CGGCCAAAAT GCGCGAGGTA
TTTGAACTGA GCCGGAAAGA GAATTTAAGC CATAAAGAAA TTGCGGAACA ACTGGATATT
TCAGAACTCA CCGTTCGCAA ACATGTGCAG CACGCCTTGA AGATCCTGCG TTTCAAACTG
GGCTTTTATC TTCTTATGAC TGTTTTAACT GCCTTCTGA
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| Protein sequence | MSGYNSISDH ELIAQLKRGN RDAFTEIYDR YFWQLHAHAY KWMRNREETR DIIHELFLTL
WEKRETLSFE HGLLSYLSAA VRNRIFNLLA HKRIESKYLS SLDDFINEGI CITDHLIREK
QLTSLIENEI SGMPAKMREV FELSRKENLS HKEIAEQLDI SELTVRKHVQ HALKILRFKL
GFYLLMTVLT AF
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