Gene Phep_3361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3361 
Symbol 
ID8254480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3986279 
End bp3987346 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content38% 
IMG OID644937013 
Producthypothetical protein 
Protein accessionYP_003093617 
Protein GI255533245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.148862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TTATAAATAT TGCATTATGC ATAATTGTAT TGGCATCATG TAAAAAAGAT 
CCTGTGTTAA TAGATAAGGA TAAGTATATC TATGACATTC CGGCAATTAA ACTTACATCA
GATGCTAAGG TAGGTGCATA TTATTTTAAT TATACAGCAA CGGATTGGAA TAAAGCGCAT
TCAGATACCT CATTGGTGGT GCCGGTTGGG GGCAAATCTT ATAATGCAGT TACAGATGCT
GCTGTATTCC CTCAGCAACT TAACTGGGCA GACGAGGCAG GCGTAGATTA CCTGATCTTT
AAATGGAATG CAGCGGCTAC AGATAATTCG CTGTTAAGTG CATTTGCATC AAGAAGAACG
AATCAGAACG TAAAGATGGT TATTGGTTTC AATACTGCAC ATCTTAATGC TACAAATGCC
GCCCCATTAA CAGGTACAAA GCTGCAGACT ATGGTTAATG AGTTTAAAAC CTTGGTTACG
CAGCATATCA GCAAGGATTA CTATTATAAA ATTGGTGGAC GTCCTGTAAT CTTAATTACC
CCACTTAATC TTTCATCATC AGCCCTGACC AGTATAGATT ATAAAATGGT CATGGCATCG
TTAAGAACAG AATTTACTGC ATTGGGCATT AATCCTTATT TTATCGGAGA ATTATCGACA
GGATGGACGG CCCCGGTTAA TTTTGATCAG ACTGCCCTTG CAGCTATGGA TGCAATTGTT
TTGAATACCT GGAATACGCC AGATTATGAC AGGTGGTATG GATTTTACAG TTATGTTGAC
CTGAGCTGGC AAAACTGGAA AACTTCACTG GATAAACTAA ATGTGGAATA TGTGCCCTGC
ATATTTCCGG GTTATAATGA ACCTAGTGCT GCAACACAGC GGATTATAGA GAGAACAGAA
AAAAATTATG TGGATTATAC CAATGTGGCC AAACGTAATA TGGGCACAAA TCAGATGGTA
ATTATCAATT CCTGGAATGA TTTTTCTAAA GGGACAGCGC TTGAACCTTC TAAAAAGTTT
AACAAACAGT TTCTGGGGAT TACCAGAAGA GAATTCAAGG TGCAGTAA
 
Protein sequence
MKKIINIALC IIVLASCKKD PVLIDKDKYI YDIPAIKLTS DAKVGAYYFN YTATDWNKAH 
SDTSLVVPVG GKSYNAVTDA AVFPQQLNWA DEAGVDYLIF KWNAAATDNS LLSAFASRRT
NQNVKMVIGF NTAHLNATNA APLTGTKLQT MVNEFKTLVT QHISKDYYYK IGGRPVILIT
PLNLSSSALT SIDYKMVMAS LRTEFTALGI NPYFIGELST GWTAPVNFDQ TALAAMDAIV
LNTWNTPDYD RWYGFYSYVD LSWQNWKTSL DKLNVEYVPC IFPGYNEPSA ATQRIIERTE
KNYVDYTNVA KRNMGTNQMV IINSWNDFSK GTALEPSKKF NKQFLGITRR EFKVQ