Gene Phep_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3358 
Symbol 
ID8254477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3981061 
End bp3982317 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content39% 
IMG OID644937010 
Productmetallophosphoesterase 
Protein accessionYP_003093614 
Protein GI255533242 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.44178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0362218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAT CTGGATTGAT CTTAATTATG CTGAGCGTAT TTTTTTCTGC CGGTGCTTTT 
GCACAGCCTA AAAATATACA CCTGAGCTGG ACAGGGCAAC ACGAAACAAA TACCAGCCAT
ACCATGGCCA TTACCTGGAA CAGCAAAATG CCAAATAATA AAATGGTTAG ATATGGGCTT
AAAAGTGATC AGCTGAACAA CCTGGCCACT GCTTTGGTAA ATGCAAAAAG TGGTTTAAAA
GGCGCCTATA TTTATAAGGC TGAGTTAAGT AATTTACGGG ACGGGACGAC TTATTACTAC
CAGTGTGGTT CTGATTTGGA GGGCTGGAGT GCTGTTTATT CTTTTAAAAC CGCACCTAAA
ATCGGTAAAA GAGGTAAATA TGTAGTTGGG GTTTGGGGCG ATACCCAAAA TAACAAGGGT
AACCTTGATT TTGAAGAAAC CAGCAAAATA GTTCAGAAAA TGGCGCAACA TAAATTCAAT
TTAATTGCGC ACATGGGTGA TGTTGTAGAA AATGGATCTG TAGTTAAAAG TTGGGATGCT
TTTCTAAATA CTACACAGCC ACTTAATGCA CAGATACCGT TTATGCCTGT AACCGGTAAT
CATGACGTGG TAAACGCAAA CCAGGACACC TCTTTCCAAA AACCTTTTCC GATCTATTAT
GATTTATTTA ATCTTCCGGG AGATTATATC AATTATTCTT ATGACTATGG GAACATCCAT
TTTGTAGCTA TCAATTCTGG ATATGCACAA GGAGCGGCCA AAGTAGATAA GTTGTTATAT
GAAAAGGGTT CTCCGGAATA TAACTGGCTA AATGATGACC TTACAAAGGC CAGAAAAAAT
AAAAGAATTG AATGGATTAT TCTGTATGCA CATTATCCCA TGTACGCCTA TGGGGTGAGT
TTAGTACCAC AATGGCAAAA AAATGTGACC CCTCTTATTG ATAAATATAG CATAGACCTT
TGCTTAACCG GACATCGTCA TGTGTACGAA CGCCATACTG CCATTAAGAA CGACCAGATT
TTTAAATCGG CAGATAAACA TATCTATCAA AAGCCTGAGG GGACAGTTTA CATTACCAAT
GGATCGGCCG GAGGTTCTTT GCAGGGGATT GGTGGTACAG ATATGCCTTC TATGGTATTT
ACACCCAGTG AAAAGATGTA TACCTATGCC GTAATGACCA TAGAAAATAA TCAGCTCAGT
TATGAGGTGT TTAATACCGA AGGGTTAATG ATTGATCACT TTAAAATCAT AAAATAA
 
Protein sequence
MKPSGLILIM LSVFFSAGAF AQPKNIHLSW TGQHETNTSH TMAITWNSKM PNNKMVRYGL 
KSDQLNNLAT ALVNAKSGLK GAYIYKAELS NLRDGTTYYY QCGSDLEGWS AVYSFKTAPK
IGKRGKYVVG VWGDTQNNKG NLDFEETSKI VQKMAQHKFN LIAHMGDVVE NGSVVKSWDA
FLNTTQPLNA QIPFMPVTGN HDVVNANQDT SFQKPFPIYY DLFNLPGDYI NYSYDYGNIH
FVAINSGYAQ GAAKVDKLLY EKGSPEYNWL NDDLTKARKN KRIEWIILYA HYPMYAYGVS
LVPQWQKNVT PLIDKYSIDL CLTGHRHVYE RHTAIKNDQI FKSADKHIYQ KPEGTVYITN
GSAGGSLQGI GGTDMPSMVF TPSEKMYTYA VMTIENNQLS YEVFNTEGLM IDHFKIIK