| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3344 |
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| Symbol | |
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| ID | 8254463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3967112 |
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| End bp | 3968095 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936996 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003093600 |
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| Protein GI | 255533228 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.430093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA TTTCGATTCT TGTACCCAGA GGGCAGGCCG TTTTAAGCAG CATAGTTGGT
CCTTATAAAG TGTTTAGCCA TGTAAACGAG CACCTGACCA ATATGGGTAA GCCCCCTTTG
TTTAAAATCC AGCTGGTAGG TATTAGTACC GAGACTGAAT TGTATGATGG CTTATTTACA
GTTAAACCTC ATGTTCTGCT TAAGGAAGTG GATAAGACTG ATCTGGTGAT TATTCCGGCC
CCTAACGGCG ATATGATGAA GGCGCTGGTA TTGAACCAGG AGTTTTTACC CTGGATTACT
GCGCAGTACA AGGCTGGCGC TGAAGTGGCC AGTTTATGTG TTGGTGCATT TTTACTGGCC
TCTACTGGCT TGCTGAAAGG AAAAAAATGT GCCACACACT GGATGGCTGC CAATGCTTTC
AGGAAGATGT TTCCGGATGT GAACCTGGTA GCAGATAAGA TCATTACAGA CGAAAACGGC
ATTTATTCAA GCGGGGGCGC TTATTCTTTT CTGAACCTGA TGCTGTACCT GGTAGAAAAG
TATGCAGGCA GGGATATAGC TATTTTGTGT TCAAAAATAC TGGAAATAGA ATTTGACAGA
GGGAGCCAGT CGCCCTTTAT CATTTTTGAA GGCCAGAAGG AGCATGATGA TGAGCCTGTA
AGGAGGGCAC AAACCTATAT TGAAAAGAAT TTCCAGGAAA AGATTACGGT AGATCAGCTG
GCGATGATGT TTGCATTGGG CAGGCGTAAC CTGGAACGGC GGTTTAAAAA GGCTACATCA
AATACCATTG CGGAGTACAT GCAAAGGGTT AAAATTGAAG CCGCAAAAAT GAGTCTGGAA
AGCTCCAGAG AGAACGTGAA TGAAGTAATG TATAAGGTAG GCTATACAGA TACAAAGGCT
TTTCGTACCA CTTTTAGAAA AGTTACCGGA CTATCGCCGG TGCAGTACAG GAACAAATAT
AGTCGCGAAG TGGTACAGTT TTAA
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| Protein sequence | MKHISILVPR GQAVLSSIVG PYKVFSHVNE HLTNMGKPPL FKIQLVGIST ETELYDGLFT
VKPHVLLKEV DKTDLVIIPA PNGDMMKALV LNQEFLPWIT AQYKAGAEVA SLCVGAFLLA
STGLLKGKKC ATHWMAANAF RKMFPDVNLV ADKIITDENG IYSSGGAYSF LNLMLYLVEK
YAGRDIAILC SKILEIEFDR GSQSPFIIFE GQKEHDDEPV RRAQTYIEKN FQEKITVDQL
AMMFALGRRN LERRFKKATS NTIAEYMQRV KIEAAKMSLE SSRENVNEVM YKVGYTDTKA
FRTTFRKVTG LSPVQYRNKY SREVVQF
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