| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3278 |
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| Symbol | |
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| ID | 8254397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3890391 |
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| End bp | 3891722 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644936931 |
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| Product | anaerobic c4-dicarboxylate antiporter, Dcu family |
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| Protein accession | YP_003093535 |
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| Protein GI | 255533163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.737723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTGGA TACAGCTTGC AGTTTTAATT CTGCTGATAT TGGTGGGTGC ACGTATGAAA
GGAATAGGTC TGGGTGTAAT GGGGGCTGTA GGGCTGCTGA TATTTGCACT TGGATTTGGC
CTTAAGCCAA CTACCCCGCC AATAGATGTG ATGCTGATCA TTTTGTCGGT TGTTACCGCA
GCAGCGGCCT TGCAGGCCGC AGGGGGTATG GACTATATGG TAAGCATTGC CGAGAAGATC
CTGCGCAGAA ATCCCAACCA CATTACCTGG CTGGGCCCCT TGGTTACCTA TTCTTTTACC
CTTGTTGCAG GTACTGCGCA CATCATTTAC TCCTTGCTGC CCATCATTGC AGAAGTTGCT
ACTAAAAAGA GGGTAAGGCC AGAGCGCCCA CTTAGTATTT CTGTTATTGC TGCCCATCTG
GCCATTACCG CCAGTCCCAT TTCTGCTGCA ACAGTTGCTT TAACTTCCTT AATTGCGCCC
AAAGGTTACG AACTAACAGA CATTCTTATC GTAGCCATTC CCGCAACCAT CATTGGTGTA
CTGGCCGGGG CACTGGTAGC CAGCCGTCAG GGAAAAGAGC TGATGAAAGA CCCTGAATTC
CTGGAAAGAT TAAAAGACCC TGAATTTGTG AGACTACTGG ATGGCGATCC TGCTGATCAC
ACAAAGGAAA AAATTTTCAG CACTGCTGCT AAAAGATCAG TCTATGTTTT TCTCCTGGCG
GTAATTAGTG TCGTATTGTT TGCTGCAATT CCTTCACTTC GTCCCTCTTT CCTTACAGAT
GGTAAAATGC AACCCCTGCG TATGGTCGAA ATGATAGAAC TGCTTATGCT TACTGCGGCG
GCTGCCATTA TTCTGGTGAC CAAAACTCCG GCTGCCAAAG TATCCCAATC TACAATTTTC
CGTTCCGGAG GCGAAGCCGT AGTGTGTATA TTTGGTGTAG CCTGGATGAG CGATACCTAT
TTGCAAGCCC ATATGCCCTT TTTTGAAAGC CATCTAAGCG ATTTTGTAAC TGTTCATCCA
TGGACATTTG CCATTGCACT CTTTGTCATG TCCATCCTTT TGTTCAGTCA GGCTGCTACT
GTAAGGGCAC TCATGCCACT GGGCATCTCT CTTGGTATTC CAGCTCCGGC CCTTATTGCC
ATGTTTCCGG CCGTTAATGG CGACTTTGTG ATCCCAAGCT ATCCTACACT GGTAGCAGCA
ATGGGCTTCG ACAGAACCGG CACTACAAAG ATAGGCCGTT TTCTGATTAA CCATTCTTTT
ACCCCACCAG GCTTAACAGC AGTTATTGTA ACCATTGCAA CCGGCTTTCT CCTTGCTGCT
GTTCTGTTGT AA
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| Protein sequence | MVWIQLAVLI LLILVGARMK GIGLGVMGAV GLLIFALGFG LKPTTPPIDV MLIILSVVTA
AAALQAAGGM DYMVSIAEKI LRRNPNHITW LGPLVTYSFT LVAGTAHIIY SLLPIIAEVA
TKKRVRPERP LSISVIAAHL AITASPISAA TVALTSLIAP KGYELTDILI VAIPATIIGV
LAGALVASRQ GKELMKDPEF LERLKDPEFV RLLDGDPADH TKEKIFSTAA KRSVYVFLLA
VISVVLFAAI PSLRPSFLTD GKMQPLRMVE MIELLMLTAA AAIILVTKTP AAKVSQSTIF
RSGGEAVVCI FGVAWMSDTY LQAHMPFFES HLSDFVTVHP WTFAIALFVM SILLFSQAAT
VRALMPLGIS LGIPAPALIA MFPAVNGDFV IPSYPTLVAA MGFDRTGTTK IGRFLINHSF
TPPGLTAVIV TIATGFLLAA VLL
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