Gene Phep_3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3276 
Symbol 
ID8254395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3888431 
End bp3889318 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content46% 
IMG OID644936929 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_003093533 
Protein GI255533161 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCA TAAAAACATC AGATCTTAGT CCGGCGCAGC TGCAAAATTA TATGCAGTAT 
GCCGTTGCGC CCCGGCCCAT CTGTTTTGCG ACTACCATAG ATGCAAAAGG GAACATCAAT
CTGAGCCCCT TTAGCTTCTT TAACATGTTC AGTACCAATC CGCCTCTCTG TGTTTTTTCA
CCCGCCAGAA GGGTGCGCGA CAATACTACT AAACATACTT TAGAGAACAT CCTTGAAGTT
AAAGAATGTG TCATCAACAT CGTAAACTAT GCTATGGTAC AGCAAACCAG TCTGGCCAGC
ACAGAGTATG CAAAAGGTGT AAATGAATTT GAAAAGGCGG GTTTTACCAT GCTCCCTTCT
CAGCTGGTTA AACCCCCCAG GGTTGCTGAA GCCCCGGTGC AAATGGAGTG TATGGTTAAA
GAGGTGATCC ATCTGGGTGA AAACCCGGGT GCGGGAAACC TGATCCTGGC AGAAGTAAAA
CTGATCCACA TTAAAGAAGA TATCCTGGAT GAAACCGGGA AAATAGACCA GGCTAAGATA
GATCTTGTGG CGCGGCTTGG GGGCGACTGG TATTGCCGTG TTACACCAGA GAGCCTGTTT
AAAGTTGCCA AACCCTTAAC AACCTTAGGA ATAGGGGTAG ATGCCCTGCC CAAGGCGGTA
AGAAATTCAA GGGTACTGAC CGGTAATGAC CTGGGGATGC TGGGTAACAT AGAGCAACTG
CCAACCGATG AGGAAATTGA TGCGGTAAGA AACCTTCCGG AAGTAAAGGA AATTATGGAT
GCTACTATTG GCGACGCCAG TAACCGGGAA CGTGAACTGC AGCAGCTTGC ACAGCAATGG
TTAAACAAAG GAAATGTAAA CGATGCATTA AAAGTGGTTC TATTATAA
 
Protein sequence
MLTIKTSDLS PAQLQNYMQY AVAPRPICFA TTIDAKGNIN LSPFSFFNMF STNPPLCVFS 
PARRVRDNTT KHTLENILEV KECVINIVNY AMVQQTSLAS TEYAKGVNEF EKAGFTMLPS
QLVKPPRVAE APVQMECMVK EVIHLGENPG AGNLILAEVK LIHIKEDILD ETGKIDQAKI
DLVARLGGDW YCRVTPESLF KVAKPLTTLG IGVDALPKAV RNSRVLTGND LGMLGNIEQL
PTDEEIDAVR NLPEVKEIMD ATIGDASNRE RELQQLAQQW LNKGNVNDAL KVVLL