Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3268 |
Symbol | |
ID | 8254387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3881076 |
End bp | 3881555 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644936921 |
Product | putative transmembrane protein |
Protein accession | YP_003093525 |
Protein GI | 255533153 |
COG category | [S] Function unknown |
COG ID | [COG5500] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.398918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0684452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATA CTATACTATT TTTATCCATA CTTACAACTG CCCTGATGGC TGGGCTCTTT TATAGCTGGT CAATTTCAGT TATGCGCGGT CTGAAGACAT TGCCCGACAG GGAATTTATC CTGTCGATGC AGGCCATGAA CCGTGCCATT CAGAATCCTC TCTTTTTTAT ATGTTTTTTT GGTGCGGCAA TATTTTTACT GATCAGTTGT TATCAGCAAT TTGGCCCTTC ATTAAATCGG GAGTATTATC TTTTGATAGC AGCAACCCTG ATCTATTTAA TTGGCGTACC AGGCCTTACA ATTTTTGGTA ATGTTCCGTT AAACAACATG CTGGACAGCT TTGATGTAAA TGGTTCAAGT GTGGATTCAC TTTCGAAAAT GAGGTTGGGA TTTGAGGCGA AATGGAATTA TTTAAACAAC ATGAGAAGCA TCGCTGCAAT CCTGTCTACC TGTTTACTGC TTTTTGCGAA AATAGGATAG
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Protein sequence | MKNTILFLSI LTTALMAGLF YSWSISVMRG LKTLPDREFI LSMQAMNRAI QNPLFFICFF GAAIFLLISC YQQFGPSLNR EYYLLIAATL IYLIGVPGLT IFGNVPLNNM LDSFDVNGSS VDSLSKMRLG FEAKWNYLNN MRSIAAILST CLLLFAKIG
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