Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3261 |
Symbol | |
ID | 8254380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3872026 |
End bp | 3874182 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936914 |
Product | Catalase |
Protein accession | YP_003093518 |
Protein GI | 255533146 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0753] Catalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.393831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0386597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAGA AAAAGCCAAA TGCTGAAAAC GCAGTCAATT TAAAACAGAA AGATCTTGCG CCGGATACCA TTTCCGATCA GGGCGAATTG ATGACCACCA ATCAGGGTCT TAAAATTAAT GATGACACGA ATTCGCTGAA GGCCGGAGAA CGGGGCCCCT CTTTACTGGA AGATTTTATC CTGAGAGAAA AGATAACGCA TTTTGACCAC GAAAGAATTC CGGAAAGAAT TGTACACGCA AGGGGTTCAG GTGCCCATGG TTATTTCCAG GTTTATGAAT CTATGGGTAA GTATACCAAG GCTGGCTTTC TGCAGGACCC TTCTGTGAAG ACACCGGTGT TTGTCCGCTT TTCTACTGTT GCCGGGTTCA GAGGTTCGAC TGATCTGGCA AGAGATGTTC GTGGGTTTTC TGTCAAATTT TATACACAGG AAGGCAATTA CGATCTGGTA GGTAATAACA TGCCGGTTTT CTTTATCCAG GATGCTATAA AATTTCCAGA TCTGATCCAC GCGGCTAAAC CCGAACCTGA TAACGAAATA CCTCAGGCTG CTACAGCCCA TGATTCTTTT TGGGATTTTA TTTCACTCAG TCCTGAATCT ATGCATATGA TCATGTGGGC CATGTCGGAC AGGGCAATTC CGAGAAGTCT TCGTATGATG GAGGGTTTTG GTGTCCATAC ATTTAGGTTT ATTAATGCTG AAGGGAAATC CAGCTTTGTC AAGTTCCATT GGAAACCGAT ACTTGGAATG CACGCTGTTG CCTGGGATGA AGCCTTAAAA ATATCTGGTA AAGACCCTGA TTTTCACCGT AGGGATTTGC ATGACGCCAT AGAAAGCGGT GCTTTCCCGG AATGGGAATT CGGCGTTCAG ATTGTTGCAC AGGAAGATGA GCATAAGTTT AGCTTCGATT TACTGGATCC GACTAAACTG ATCCCTGAAG AGTTGGTGCC TGTTCAGAGA ATTGGTAAAA TGGTGCTGGA CCGCAATCCG GATAATTTCT TTGCCGAGGT AGAACAGGTT GCCTTCCACC CTGGTCATCT GGTTCCGGGT ATAGATTTCA GCAATGATCC TTTATTGCAG GGCCGTTTAT TCTCTTATAC GGATACACAA TTGTCCCGTT TGGGCAGTCC TAATTTTCAT GAAATCCCCA TTAACCGTTC AGTGAATACG GTACATAATA ATCAGCGTGA TGGACATATG CGTCAGCAAA TCAATGTAGG GAAGAGCAGT TATCATCCAA ATTCTGTAGC TGGCGGAAGC CCTGCCCAGG CAACAATAGC CGAGGGTGGA TTTTCTTCTT ATGAAGAACG TGTGGATGCG CATAAAGTAC GGGCACGGAG TAAAAGCTTT ATGGATTTCT TTAGTCAGGC TACCTTGTTC TTTAACAGTC AGTCTGAGCC GGAACAAAAC CATATTGCTG ATGCATTAAA GTTTGAATTG GGTAAAGTAG AACGGGTTGA AATCCGGCAA AGAATGGTTA ACCTCCTTAC TCTAATCAGT GTTCCTCTTG CAAACACCGT AGCGGATAGT TTAGGTTTAA AAGCGGGTAA ACCGCAGGAG CCTGTTAACC ATGTCCTTGG TGCAGATGCC AATCCGGCAG ATTATAAACC GGTTAAAGTA AAATCAGAAA TTGAAAAATC GCCGGCCCTG AGTATGGCCA ATGCGCCAAA AGACAGTATT AAGACCAGAC AAGTTGCTTT CCTGGCTGCC AACGGTGTTG AGTCGACAGA CTTTGAAAAT ATGAAAAAGG CACTTCTTGC TGCTGGTGCT GTTGTTAAAG TGGTTGCGCC TAAAAATGGC ACATTAAAAG ATTCGGCTGG TAAAGAAATC AAAATTGACA TGAGTTTCCT GACAGGTACA TCAGTAGTAT TTGATGCTGT GTATGTACCA GGTGGAGGGA AAAGCATTGA TGCCCTATTG GCTGAACCTG ATGCTGTTCA TTTTATTAAT GAGGCTTATA GACATTGCAA AGCCATAGCA GCCACAGGTA AAGGCGCTGA ACTGATCAAC CAAAGCTATG TAGGTGCGAA ATTGAAAAAT GGCAATGCAG ATGCAAAGGC AGGTATACTG ACAGAAGCTG CACCTGATGC TTTTATTAAG GCAATCGCCC AGCACCGTTT TTGGCAAAGA GAGAAAAAAG ATAAAGTTCC GGCCTGA
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Protein sequence | MEKKKPNAEN AVNLKQKDLA PDTISDQGEL MTTNQGLKIN DDTNSLKAGE RGPSLLEDFI LREKITHFDH ERIPERIVHA RGSGAHGYFQ VYESMGKYTK AGFLQDPSVK TPVFVRFSTV AGFRGSTDLA RDVRGFSVKF YTQEGNYDLV GNNMPVFFIQ DAIKFPDLIH AAKPEPDNEI PQAATAHDSF WDFISLSPES MHMIMWAMSD RAIPRSLRMM EGFGVHTFRF INAEGKSSFV KFHWKPILGM HAVAWDEALK ISGKDPDFHR RDLHDAIESG AFPEWEFGVQ IVAQEDEHKF SFDLLDPTKL IPEELVPVQR IGKMVLDRNP DNFFAEVEQV AFHPGHLVPG IDFSNDPLLQ GRLFSYTDTQ LSRLGSPNFH EIPINRSVNT VHNNQRDGHM RQQINVGKSS YHPNSVAGGS PAQATIAEGG FSSYEERVDA HKVRARSKSF MDFFSQATLF FNSQSEPEQN HIADALKFEL GKVERVEIRQ RMVNLLTLIS VPLANTVADS LGLKAGKPQE PVNHVLGADA NPADYKPVKV KSEIEKSPAL SMANAPKDSI KTRQVAFLAA NGVESTDFEN MKKALLAAGA VVKVVAPKNG TLKDSAGKEI KIDMSFLTGT SVVFDAVYVP GGGKSIDALL AEPDAVHFIN EAYRHCKAIA ATGKGAELIN QSYVGAKLKN GNADAKAGIL TEAAPDAFIK AIAQHRFWQR EKKDKVPA
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