| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3253 |
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| Symbol | |
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| ID | 8254372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3859580 |
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| End bp | 3861151 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936906 |
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| Product | glycosyl hydrolase BNR repeat-containing protein |
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| Protein accession | YP_003093510 |
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| Protein GI | 255533138 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4409] Neuraminidase (sialidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.962324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.018694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACA GAAAAATATT TAACCATTTT ATCCTGTTCA TCTTTATAGC AGCTGCATTA
GCTTGTTCAG ATAAAATTTA CAAAGCCCGG GATAGGGGCG GCATAAGCAT TAAAGCCGAA
CCAACCATTA ATCCTATCTT TAAAAGACTG GAAGTCAATC CGTATCTGCG TCTGGAAATT
GACATCCCAG AAGGTACTGA GGCGATAACA TTCCAGCAAT TTAAAGGCAG TATAGAAACA
GCAGGATTAC AAGATATCGC AAAGCTGGAG CTTTACCAGG GAGATGATCA GCAGGAACTT
TCAAAAAATA AATTGCTGGG GAGTACAATA CCCTCAACAA ATCAGTTTAG CATTACGCTT
GGCACGACTT TAACACCAGG AAAACACAGC TTATGGCTAA GTGTAACCTT AAAAGACAAT
GCTGATATTG ATCATCAGCT GCGGATCAGA GCTGATCAAT TGACCAACGC ATCAGGCCTG
ATCTATAAAG TGGCACAACA CCAGATCAGT TCAAGATACC TGGGCATCGC CCTGCGCAAA
CCCAATGACG AAAATGTACA CACTTACCGC ATCCCCGGTA TGATCACCAC AGACAAAGGA
ACTTTAATTT CCGTTTACGA TATCCGTTAT GACAATGACA AAGACCTGCC GGGCAATATT
GACGTAGGAA TGAGTAGAAG TACCGACGGA GGTAAAACCT GGGATACCAT GAAAAATATT
ATGGATATGG GTGGACCGGC AGATAACAGT GGTTCCGGCG ATCCTTCAAT CTTATTTGAC
CCTGTCACTA AAACCATATG GGTTTCAGCC CTATGGAGTA AAGGTAACCG CTCTATTGCA
GGCTCAGGAC CCGGTTTAAG TCCTGAAGAA ACCGGGCAGT TCCTGGTTAC CAGCAGTAAG
GATGACGGAT TAACCTGGAC CAAACCCTAC AGCATCACTA ACCAGGTTAA AAATCCGGAA
TGGCGCTTGT TTTTCCCTGG TCCGGGTAAT GGAATTGCCA TGGCAGACGG GAAAATTGTT
TTCCCGGCAC AATACTGGGA TGCCGCAAAA ATGCCGCATT CCACCTTAAT CTATAGCGAT
GACCATGGTA AAAGCTGGAA AGCAGGGCTT GGTGCAAAGT CAAATACCAC AGAGGCCCAG
CTTGTAGAAA CAAACCCGGG AACTTTAATG CTGAACATGC GGGACAACAG GGGTGGGTTC
AGGAGCGTAG CTACCACAAA AGATATGGGA CAAAGCTGGA TCGAACATGC AACGTCCTAT
AGTGCCTTAC CCGACCCGGT TTGTATGGCC AGTTTAATAA AAGTCAATGT AAAATTTAAG
CGCGTATCAA AGGATGTCCT GTTTTTCAGC AATTTGAATA TTTCAACGCC TCCCAGGGCA
CATACTACCA TTAAAGCTAG TCTGGATTTA GGAGAGTCCT GGCAACCTGT AAATCTATTG
CACCTTGATG AACGTAAATC TTACGGCTAT TCCGTACTTA CTAAAATAGA TGACCAGACC
CTGGGTTTGC TATATGAAGG CATCAGGACT TTGCTGTTTG TTAAAATTCC CGTAAAGGAT
ATCATTAAAT AA
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| Protein sequence | MNNRKIFNHF ILFIFIAAAL ACSDKIYKAR DRGGISIKAE PTINPIFKRL EVNPYLRLEI
DIPEGTEAIT FQQFKGSIET AGLQDIAKLE LYQGDDQQEL SKNKLLGSTI PSTNQFSITL
GTTLTPGKHS LWLSVTLKDN ADIDHQLRIR ADQLTNASGL IYKVAQHQIS SRYLGIALRK
PNDENVHTYR IPGMITTDKG TLISVYDIRY DNDKDLPGNI DVGMSRSTDG GKTWDTMKNI
MDMGGPADNS GSGDPSILFD PVTKTIWVSA LWSKGNRSIA GSGPGLSPEE TGQFLVTSSK
DDGLTWTKPY SITNQVKNPE WRLFFPGPGN GIAMADGKIV FPAQYWDAAK MPHSTLIYSD
DHGKSWKAGL GAKSNTTEAQ LVETNPGTLM LNMRDNRGGF RSVATTKDMG QSWIEHATSY
SALPDPVCMA SLIKVNVKFK RVSKDVLFFS NLNISTPPRA HTTIKASLDL GESWQPVNLL
HLDERKSYGY SVLTKIDDQT LGLLYEGIRT LLFVKIPVKD IIK
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