Gene Phep_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3238 
Symbol 
ID8254357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3844591 
End bp3845109 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content44% 
IMG OID644936891 
Producthypothetical protein 
Protein accessionYP_003093495 
Protein GI255533123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0696551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAAA TATTATCAAT AGCTATTGCA TGCTTTTTTA CATGGAATTA CAGCCTGGCA 
CAAACAAATG GCAACGAATC AAAAATTGGA CTTGGCCTGG AAGCAGCCTT TCCGGTAGGG
AATTTTAAAG ACATCGCCGA CTATGGAATT GGTGTTTCAC TGCTTTATCA GAAACCGGTT
GCCAAAAACC TGATCATTAC CGGTAATGTT GGCTACATCA GGTTCCAGGG GCCGGCTGTT
TTCTCCAATA TTAAATATAA ACAGGGTTTT GTACCTATAA AAGCTGGTGC AAGGTATTTC
ATCATACCGC ATGTTTATGT TGCCGGCGAA TTGGGGATAT CCATTTCTAC GGCCAATGGC
TATGGTTCGG GAACCTCCTT TACCTACGCT CCAGGTCTGG GCGCAGAATT CCCGGTATCC
GGGACAGGGA CTATAGATAT TGGGCTGCGT TACGAAAGCT GGTCCAGAAG TACCGGCACT
TTGTCTTTTC CTGGTTTAAG GGCAGGTTAT AATTTTTAA
 
Protein sequence
MKKILSIAIA CFFTWNYSLA QTNGNESKIG LGLEAAFPVG NFKDIADYGI GVSLLYQKPV 
AKNLIITGNV GYIRFQGPAV FSNIKYKQGF VPIKAGARYF IIPHVYVAGE LGISISTANG
YGSGTSFTYA PGLGAEFPVS GTGTIDIGLR YESWSRSTGT LSFPGLRAGY NF