Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3237 |
Symbol | |
ID | 8254356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3843851 |
End bp | 3844579 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936890 |
Product | ABC-2 type transporter |
Protein accession | YP_003093494 |
Protein GI | 255533122 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03518] gliding motility-associated ABC transporter permease protein GldF |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0727284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGCAG TTTTTAAACG GGAATTGTTC AGCTTGCTGA ATTCGCTGAT GGCTTATATT ACGATTGGTA TTTTTTTGCT GGTCTCGGGT TTACTGCTTT GGTTCTTTCC TGATACCTCT GTACTGGAAT ATGGCTATGC AGAGCTGACC GGTTTTTTTA GCCTGGCACC TTTCTTATTT ATGTTCTTAA TTCCTGCGGT TACCATGCGC TCCTTTGCCG AAGAAAGAAG GGAAGGTACT TATGTTTTGC TGGCTACCAG GCCCGTAACC GACTGGCAAA TTGTGCTTGC CAAGTATTTT GCCTGCCTGA TATTGCTGTT GTTTGCCCTT ATTCCTACAC TAATCTATTA TTTTACAGTA TCGCAATTGG CCTTGCCCAA AGGAAACATC GATGCCGGGG CAGTCATTGG TTCGTACATT GGTTTATTGC TGCTGGGGGC TGCATTTACA GGGATTGGTA TTTTTGCTTC TTCCATTACC AAAAATCAGG TGATCGCTTT TGCTGTAGCT GCATTTTTGT GTTTTATAGC CTATATTGGT TTTGATGCCC TAAGCCAGTT GTTTAGCCTG AGTTATTTTG AAAATGTATT TCAGTCATTG AGTGTAAATG AACATTATCA GTCCATAAGC AGGGGGGTGC TGGATACCCG GGACCTGGTA TACTTTATCA GTTTTATACT TGTGTTTTTA GGGGCGGCAA GGTTAGTGAT AGGAGGGCGG AAATGGTAA
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Protein sequence | MYAVFKRELF SLLNSLMAYI TIGIFLLVSG LLLWFFPDTS VLEYGYAELT GFFSLAPFLF MFLIPAVTMR SFAEERREGT YVLLATRPVT DWQIVLAKYF ACLILLLFAL IPTLIYYFTV SQLALPKGNI DAGAVIGSYI GLLLLGAAFT GIGIFASSIT KNQVIAFAVA AFLCFIAYIG FDALSQLFSL SYFENVFQSL SVNEHYQSIS RGVLDTRDLV YFISFILVFL GAARLVIGGR KW
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