| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3236 |
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| Symbol | |
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| ID | 8254355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3842178 |
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| End bp | 3843857 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936889 |
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| Product | ABC-type uncharacterized transport system involved in gliding motility auxiliary component |
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| Protein accession | YP_003093493 |
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| Protein GI | 255533121 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3225] ABC-type uncharacterized transport system involved in gliding motility, auxiliary component |
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| TIGRFAM ID | [TIGR03521] gliding-associated putative ABC transporter substrate-binding component GldG |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0923144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAAC TTAAAAAATA CCAGAGCAGA GCAGTTATTT TTGTATTGCT GCTCCTGTTG
CTCAACATCG TTTCGCAGTT TGTATATACC AGAATAGATT TTACCAAAGA AAAGCGCTTT
ACGCTGAACC CTAAAACAAC ATCGATCTTG AAAGATGCCA GTAAGCCCAT CCTGATTACC
GTTTTTCTGG ACGGAGAACT TCCGGCTGCT TTTAAAAGAT TGCAGCGTGC TGCAAAAGAT
CTGCTGACCG ATTACAGGGC ATACGCCGGA ACAGACATCA AAATTGTATT TGCCGATCCG
ATTGACGGCT TATCAGCAGC GGAACAGGAT ACAGCCATCA ACAACCTGTA TCAGGTAGGT
ATAGAGCCTA CCAATCTGAA CATTAAAAAT GACAATGGTT TTGCGCAGAA GGTTATTTTT
CCGATGGCCA TGGTCAGCAG TGGTGATAAG CGCTTTCCGG TCAGACTGCT CCAAAACCTC
AATCCCAGTG GCAGTTATGA AGAAAGTATC AATCATTCCA TACAGAACCT GGAATATGTA
TTCACTTCGG CCATTCAAAA GGTGCTGACC GGCGAACATC CCCGGATAGG TTTTACCGAA
GGCAATGGCG AATTGTCCGA TCCGGAGCTG CAGGATGCTA TCAAAAGCCT TTCAGATAGC
TATGAAGTGG GTAGGGTAAA CCTTGACCTG ATTGATAAAA ATGGATTGGA TAAACTGAAT
ACGCTGGTTA TAGCCAAACC TCAAAAAGAA TTTACAGAAG TACAGAAATA TAAGCTCAAT
TATTTTGTAA TGAAGGGCGG CAGTGTGGTA TGGTGTATAG ATCAGGTGGG GGCCAACCTG
GATAGCTTAA AAGGTGCCGG GGAGCAGCTG GCCTTTAACC GCAAGCTAAA CCTGGACGAT
ATGTTGTTTA TGTATGGTGC CAGGGTAAAT TATAACCTGG TTGCTGATGC CAACTGCACA
GAGATCCCCC TGGCAATGGG CGGAGGACAA GGGCAGATCC AGCTGGCTCC ATGGGTCTAT
TATCCTTTAC TGATGCCTGA TACGGCCAGT GCCATCGTAA AAAACATAGA TGATGTAAAA
GCAGAATTTG TAAGTACGGT AGATACGATA TCGGTAAAAG GCATCAGCAA AAAGATCATT
CTGCATACCT CGCCATTTAA TAAAGTTTTT AATGCACCCA AATTGCTGTC GCTCCAGATG
GTGGCCGAGC AACCCGACCC CCGTGAGTAT GCAAGTTCTC CAAAAGCTGT TGCAGTACTG
TTGGAAGGGA ATTTTCCTTC TGTATTTTTA AACAGACCTG TACCGGCGGG GATCATTGAA
AATTATGGGC TTCCTCCTGT TGGCAAAGCC AGTAAAATGA TTGTGATTGG TGATGGTGAT
GTTTTTAAGA ACCAGGTAAG CAGCAGGGAT GGCTCTGTTT TTCCATTGGG TTTTGACCGT
TATACCGAAA AGAGTTACGG AAATAAAGCG TTGTTGTTAA ATGTTGCCGA TTATTTGTGT
AATGCCGACA ATCTGATCGC CCTGCGCAAT AAAGAGGTTA AAATCAGGTT ATTGGATAAG
GGGCGTTTGC GTGCCGAAAA GCTGCAATGG CAGCTGATTA ATTTAATTGG ACCTTTACTA
TTGTTAATAT CGTTCGCAAT TTTTCAACAT TATTACCGTA AACATAAGTA TGCAAGGTAA
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| Protein sequence | MVKLKKYQSR AVIFVLLLLL LNIVSQFVYT RIDFTKEKRF TLNPKTTSIL KDASKPILIT
VFLDGELPAA FKRLQRAAKD LLTDYRAYAG TDIKIVFADP IDGLSAAEQD TAINNLYQVG
IEPTNLNIKN DNGFAQKVIF PMAMVSSGDK RFPVRLLQNL NPSGSYEESI NHSIQNLEYV
FTSAIQKVLT GEHPRIGFTE GNGELSDPEL QDAIKSLSDS YEVGRVNLDL IDKNGLDKLN
TLVIAKPQKE FTEVQKYKLN YFVMKGGSVV WCIDQVGANL DSLKGAGEQL AFNRKLNLDD
MLFMYGARVN YNLVADANCT EIPLAMGGGQ GQIQLAPWVY YPLLMPDTAS AIVKNIDDVK
AEFVSTVDTI SVKGISKKII LHTSPFNKVF NAPKLLSLQM VAEQPDPREY ASSPKAVAVL
LEGNFPSVFL NRPVPAGIIE NYGLPPVGKA SKMIVIGDGD VFKNQVSSRD GSVFPLGFDR
YTEKSYGNKA LLLNVADYLC NADNLIALRN KEVKIRLLDK GRLRAEKLQW QLINLIGPLL
LLISFAIFQH YYRKHKYAR
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