| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3196 |
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| Symbol | |
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| ID | 8254315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3802547 |
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| End bp | 3803296 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936849 |
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| Product | 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamideisomerase |
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| Protein accession | YP_003093453 |
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| Protein GI | 255533081 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.583698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.354655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACATTA TTCCTGCAAT TGATATTTTA GATGGAAAGG TAGTCCGCTT AACAGAAGGT
GATTATAACC AGAAAACAGT ATACGATGTT TCCATCGCTG AAATGATAGA GACCTACCGG
TCTAATGGTA CAGAGTTTAT ACATATCATT GATTTAAATG GTGCTAAAGG AGATTTCAGC
AACCAGAAAG CCTTGTTTGA AGTGATCAAA AAAACCGATA TGCGGGTACA GTATGGCGGT
GGAATCCGAA CCATTAAACA GGTAACGGAT TTGCTGGATG CCGGTATCCA CCGTGTAATT
GTTGGCACAC AGGCGATCAC CAATCCTGAT TTTTTACAGG AGCTGAGCAA GGAAGTAGGC
AAAAAATACG ACTATGCCAA TCGCATTGTA ATCGCCATTG ATGTATTGGA CGAGGTCATC
AAATACTCGG GATGGATGGA AAGCTCGCCA ATTAAACTGA TGGACTATGT TGACAAATGC
CTGCAATTGG GCTTTTTCAG GTTCCTGTGT ACCGATATCA ACAAAGATGG CAAACTTGGC
GGAGCAGCGG TAGAACTCTA TAAAAAACTA TTGGAACACT CTCCTTTCAT TAAACTGATT
GCTTCCGGTG GTGTAAGCTC TATGAAGGAT ATTGAAGAAC TCGACAAATA TGACATCCGT
TCGGTAGTGG TTGGAAAGGC TATTTACGAG AACAGAATTA CCATAGACCA GATCAAGGAG
TGGAATTTAA AACAAATGAC TTCCCTGTAA
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| Protein sequence | MYIIPAIDIL DGKVVRLTEG DYNQKTVYDV SIAEMIETYR SNGTEFIHII DLNGAKGDFS
NQKALFEVIK KTDMRVQYGG GIRTIKQVTD LLDAGIHRVI VGTQAITNPD FLQELSKEVG
KKYDYANRIV IAIDVLDEVI KYSGWMESSP IKLMDYVDKC LQLGFFRFLC TDINKDGKLG
GAAVELYKKL LEHSPFIKLI ASGGVSSMKD IEELDKYDIR SVVVGKAIYE NRITIDQIKE
WNLKQMTSL
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