| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3174 |
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| Symbol | |
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| ID | 8254293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3779642 |
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| End bp | 3780217 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644936827 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003093431 |
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| Protein GI | 255533059 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.192899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.919129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGCC TTGACGAAAA AAAAATACTT GAGGAATTGA ACGCCGGAAA CTACCAGGCC
TTTACAGTCC TGTATGAAAA ATACTGGGAA ACACTTTTCC TTTATGTTCA GCGGATTATC
CATAATGAAA GCGAAGCAAA AGACATTATT CAGGATACTT TTTTAACCAT CTGGAACCTG
AAAGGGAAGC TGGGGCACGT CCATTCCTTT AAAGCTTATG CTTTAACCAT TGCTGGCCGT
AAAGCACTCC GTCATATTCG TAACCACGCA CACAAAACCG AACTGATAGA TGGTTTTATA
ACTTTTCTAA AAGATCATGA ACCGAATGCA TTAGATCAGC TCATCAAAAA TGAGCTGGCA
ATATTTGTAA ATCAGGAAAT TGATAAAATG CCTGAAAGAA TGAGGGAAAC CTATAAAAAA
AGTAGGGAGG AAGGTTTGTC TAACCGCGAA ATTGCTGCTT TGATGGAGGT GAGCGACCAG
ACTGTTAAAA AACAGATCAA TTATTCTTTA AGGCACTTGC GCCTCGGGCT TTCCAAATTC
CATGTATTGT TTATCTTTTG CTTTTTATTT CAGTAA
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| Protein sequence | MTSLDEKKIL EELNAGNYQA FTVLYEKYWE TLFLYVQRII HNESEAKDII QDTFLTIWNL
KGKLGHVHSF KAYALTIAGR KALRHIRNHA HKTELIDGFI TFLKDHEPNA LDQLIKNELA
IFVNQEIDKM PERMRETYKK SREEGLSNRE IAALMEVSDQ TVKKQINYSL RHLRLGLSKF
HVLFIFCFLF Q
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