Gene Phep_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3154 
Symbol 
ID8254272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3759015 
End bp3759917 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content44% 
IMG OID644936806 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003093411 
Protein GI255533039 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTA AAAACTTTGA CGTCATCATC ATCGGAGGTA GTTATGCCGG TTTATCTGCG 
GCCCTCTCCC TCGGCAGAGC CATTAGAAAA GTATTGGTTA TTGACAGTGG AAAGCCTTGC
AACCGTCACA CCCCTCATTC TCACAATTTC CTTACACAAG ATGGAAAAAC ACCCGCTGCT
ATTGCAGAAA TTGGAAAGGA ACAAGTCCTG CAATACCCAA CAACACAGTT CATGGATGCA
CAGGTTACAG CAGTAAAAAG AGAGAAAGCA CAGTTTCTCG TATCCACCTC CGGCCATCAC
GATCTTACCG CAAAAAAAGT GCTGTTTGCA ACTGGAGTAA AAGATCTGAT GCCAAATATC
GAATCCTTTG ATGATTGCTG GGGAATCTCA GCTATACATT GCCCATATTG TCATGGGTAC
GAATATAAAG GGCAAAAAAC GGGTTTACTA GCCAATGGCG ACATCGCCTT TGAATTCAGT
CATCTGCTCT ACAACTGGAC AGACCAGCTA ACTATTTTCA CCAATGGCCC ATCCACCATT
ACAGCAGCAC AGGCAGATCA GCTTGCACTT AAGCACATAT TTATAGTAGA AAAGAAGATC
AGAAAGTTCC AGCATCTCAA GGGTTATATT CAGTCCGTGA GTTTTAATGA TGGAAGTACC
TTTCAGCTCG ATGCTATCTA TGCAAAACTT CTATTCGAAC AACACTGCCT GATTCCTGAG
CATCTCGGGT GTGAAATTAA CGAACAAGGA TATATTCAAA TAGATGAATT CCAAAGAACC
TCCGTGCCAG GTATATATGC TGCAGGCGAC AATACCACAG GCATGCGCTC TGTCGCATCC
GCTGTCGCTG CCGGAACAAA AGCCGGTGCT TTTATAAACC ACGATCTGAT TTCCGGAAAA
TAA
 
Protein sequence
MIIKNFDVII IGGSYAGLSA ALSLGRAIRK VLVIDSGKPC NRHTPHSHNF LTQDGKTPAA 
IAEIGKEQVL QYPTTQFMDA QVTAVKREKA QFLVSTSGHH DLTAKKVLFA TGVKDLMPNI
ESFDDCWGIS AIHCPYCHGY EYKGQKTGLL ANGDIAFEFS HLLYNWTDQL TIFTNGPSTI
TAAQADQLAL KHIFIVEKKI RKFQHLKGYI QSVSFNDGST FQLDAIYAKL LFEQHCLIPE
HLGCEINEQG YIQIDEFQRT SVPGIYAAGD NTTGMRSVAS AVAAGTKAGA FINHDLISGK