| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3079 |
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| Symbol | |
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| ID | 8254196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3677956 |
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| End bp | 3678819 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936732 |
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| Product | AMP nucleosidase |
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| Protein accession | YP_003093338 |
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| Protein GI | 255532966 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01721] AMP nucleosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0103921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAG AAAAAGATGT AAAAAAAGAA GAACAAAAGA GAGGAAAAGT AAAGAAGATA
AAAGAAGTGG AATCGCCGGT AAAGGCTGGC CTGAAATCAA AGGCTGATAT TGTACAAAAC
TGGCTGCCCA GATATACAGG AAGGCCATTA GCAGATTTTG GCCAGTACAT ACTGCTCACT
AATTTTAGTA AGTATGTACA GATGTTTTCT GAATGGCACG ATAATGCACC GGTTATGGGG
CTGGATAAAC CTATGCAAAG TGTAACAGCT GACGGGATTA CCATTATAAA TTTTGGTATG
GGAAGCCCGA TGGCTGCAAC CATGATGGAC TTGCTGACGG CAATCAGCCC GAAGGCAGTA
TTGTTTTTGG GTAAATGTGG CGGATTGAAA AAGAAGAACC AGCTAGGCGA CCTGATCCTG
CCTATTGCGG CGATAAGAGG TGAGGGGACG TCCAATGATT ATTTACCTGC TGAAGTACCT
GCATTACCTG CGTTTGCTTT ACAAAAGGCA ATATCAACCA CAATACGTGA CCATTCGAGG
GATTACTGGA CTGGAACCTG TTATACCACT AACCGCAGGG TTTGGGAGCA CGATAAGGCT
TTTAAAAAAT ACCTGAAAAC TTTAAGGGCG ATGGCTGTGG ACATGGAAAC TGCTACCATA
TTTACCACTG GTTTTGCCAA TAAGATACCC ACAGGAGCGT TATTACTGGT CTCAGATCAG
CCGATGATCC CTGAAGGAGT TAAAACAACG GAAAGCGACA GTAATGTAAC TTCCACTTAT
GTGGAAACAC ATTTAAGGAT AGGCATTGAT TCCCTGAAGC AGCTGATCAA TAACGGGCTT
ACAGTTAAGC ACCTGCATTT TTAA
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| Protein sequence | MNEEKDVKKE EQKRGKVKKI KEVESPVKAG LKSKADIVQN WLPRYTGRPL ADFGQYILLT
NFSKYVQMFS EWHDNAPVMG LDKPMQSVTA DGITIINFGM GSPMAATMMD LLTAISPKAV
LFLGKCGGLK KKNQLGDLIL PIAAIRGEGT SNDYLPAEVP ALPAFALQKA ISTTIRDHSR
DYWTGTCYTT NRRVWEHDKA FKKYLKTLRA MAVDMETATI FTTGFANKIP TGALLLVSDQ
PMIPEGVKTT ESDSNVTSTY VETHLRIGID SLKQLINNGL TVKHLHF
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