| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3074 |
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| Symbol | |
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| ID | 8254191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3672334 |
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| End bp | 3674106 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936727 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_003093333 |
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| Protein GI | 255532961 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00250927 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAGAAT TTTTTAAATA TGTTTTTGCT ACAGTGGTAG GCGTAGTCAT TTCACTGGCC
TTATTTTTAG TATTTTTTGT ACTATTGATC ATCGGAATTG TTAAAACATC CCTAAAGGAA
CAGAAAGTAA GTGTAAACAG CAATTCTGTA CTTTTGCTTA ACCTGGACCA AAGCATAACT
GAACGCACCG CTGACGATCC TTTGTCAAGA TTGCCCCTGG TTGGCTCAGA TGAGGATAAA
AGCATTGGTT TTAACGATGT GATCCGTGCG TTGCAAAAAG CCAAAACAGA CGACAACATT
AAATGTGTTT ACATCAATGT AACCTCACCT CAGGCGGGTT TTGCTACCAT GCGTGAAATC
AGGGATGCAC TGATTGATTT TAAAACAAGT AAAAAGAAAA TCATAGCCTA TAGTGAGGTT
TACACACAGG GAGCCTATTA CCTGGCTTCT GCAGCCGATA AGATTTATTT AAATCCCGAA
GGTGCACTGG AGTTTAAAGG CCTGAAATCT GAGACCATGT TTTTTAAAGG TGCACTGGAT
AAACTTGGCA TCGAAGCCCA GATTGTGAGG GTCGGTAATT ATAAAAGTGC TGTAGAGCCT
TTCTTTGCAG AAAAAATGAG CGACAAAAAC CGCGAACAGG TTACGGCCTA CCTGCATGGC
CTATATGATA CTTTTCTGGA AGGGATAGCC AAAAGCCGTA ACATCAGCAC CGAAACGCTT
TACCAGATTG CAGATGATTA TAAGATCAGG CAGCCTCAAG ACGCTGTTGC CTATAAAATG
GTGGATGAGC TGAAATATAA AGACCAGATT ATTGATGAAC TCAAAACATT AAGTGGAAAA
GAGAAAAAAA ATGATCTCAC AACCATTTCT ATTAATGACT ATGCCAGAAA TGTTGTTAAA
GACCAGCCTA CTTCCGCAAG CCAGAAAGTA GCCATAATTT ACGCCAATGG CGACATCATG
GGTGGCGATG GCTCCGATCA CCAGATTGGT TCGGAACGGA TCTCCAAAGC CATTCGGAAA
GCCCGTCTTG ATACCGATAT CAAAGCTGTT GTTTTAAGGG TAAATTCACC AGGTGGCAGC
GCTTTGGCCT CAGATGTGAT CTGGAGAGAA ATTGTACTCA CCAAAAAGAT AAAACCTGTT
ATCGCTTCAT TTGGAGATGT AGCAGCCTCT GGAGGCTATT ACATTGCATG CGCGGCCGAC
TCCATATTTG TACAACCCAA CACCATAACC GGATCTATTG GCGTATTTGG TATTATTCCT
AATTTCCAGA AATTATTTAA TGATAAACTT GGAATCACCT TTGATGGTGT TAAAACCGGA
AAATATGCAG ATATCATGAG TGTGGACAGA CCCATGACTG CAGGTGAAAG GCTGATTGTA
CAAAATGATG TAAACCGGGT ATACGATAGT TTTATTACCC GTGTGGCAGA TGGGCGTAAA
AGAACAAAAG CTTACATAGA CAGCATAGGT GGTGGCCGTG TTTGGGTTGG GACTGATGCA
GTCAGAATTG GACTGGCCGA CAGAACAGGT AACTTTAATG ATGCCATAAT TGCCGCAGCT
AAAAAAGCTA AAATAAAAGA TTACAGTATT GTGGAATATC CTGAAATGCG GGATCCCTTT
AAATCACTGA TGGACAACAC AACAGATAAG ATAAGAACTT ATTATGCCAA ACAAGAGCTT
GGTGCGAGCT ATCCTATCTA TCAGCAAATA AAATCAGCTG TATCCAGATC AGGAATCCAG
ACCAGGATGC CTTTTGAAAT TAAAATACAA TAA
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| Protein sequence | MREFFKYVFA TVVGVVISLA LFLVFFVLLI IGIVKTSLKE QKVSVNSNSV LLLNLDQSIT
ERTADDPLSR LPLVGSDEDK SIGFNDVIRA LQKAKTDDNI KCVYINVTSP QAGFATMREI
RDALIDFKTS KKKIIAYSEV YTQGAYYLAS AADKIYLNPE GALEFKGLKS ETMFFKGALD
KLGIEAQIVR VGNYKSAVEP FFAEKMSDKN REQVTAYLHG LYDTFLEGIA KSRNISTETL
YQIADDYKIR QPQDAVAYKM VDELKYKDQI IDELKTLSGK EKKNDLTTIS INDYARNVVK
DQPTSASQKV AIIYANGDIM GGDGSDHQIG SERISKAIRK ARLDTDIKAV VLRVNSPGGS
ALASDVIWRE IVLTKKIKPV IASFGDVAAS GGYYIACAAD SIFVQPNTIT GSIGVFGIIP
NFQKLFNDKL GITFDGVKTG KYADIMSVDR PMTAGERLIV QNDVNRVYDS FITRVADGRK
RTKAYIDSIG GGRVWVGTDA VRIGLADRTG NFNDAIIAAA KKAKIKDYSI VEYPEMRDPF
KSLMDNTTDK IRTYYAKQEL GASYPIYQQI KSAVSRSGIQ TRMPFEIKIQ
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