Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3043 |
Symbol | |
ID | 8254155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3637330 |
End bp | 3638802 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644936692 |
Product | hypothetical protein |
Protein accession | YP_003093303 |
Protein GI | 255532931 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0217728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGC ATTTTTTTTG GTCTAAGATA TTTTTAACCC TGTTGCTGCT GTGTTTAATA CAAACTGGTT TTAGTCAGGA TCTGTCTTTT TTGTGGGACC AATATGGTAT TTACAGGGAG CCAGCCTTGA AAGACCGTTT TTTTAAACAT AGTGATCTTG TTCCTTTGTT TCAAAAACTG GAAAAATCGG GTCTTTTTAA AATCGAAATT GCAGGCGGTT CTGCACAGGG ACGCAGTGTC TATCACCTAA CAGCTGGAAG GGGAAAGATA AAGGTATTGC TGTGGTCGCA AATGCATGGT GATGAAACCA CAGCCACAAG AGCATTATTT GACTTTTTTA ATTTTTTAAA GGCCAATGAT AAGAATGATG AGCTGAGAAA TAAACTGCTT GATCAGCTTG AACTTCATTT TGTGCCTATG CTGAACCCGG ATGGAGCTGA AATGTTTAAA AGAAGGAATG CGTTGGATAT TGATATCAAC AGGGATGCAA GAATGTTGGT TAGTCCGGAG GCAAGGATAT TAATGGACAT AGCCAAAAAA ATTAAACCTG ATTTTGGGTT TAACCTGCAT GATCAGAGTA CACTGTATTC GGCTGGACGT AGTAAAAATA CGGCAACAAT TTCTTTTCTG GATCCTGCCT TTAATTATGC AAAAGATATG GATGACGTAC GTAAAAAAGC CAGGCAGGTA ATTTTACTGA TGAATAACGT GCTGCAAAAG CTTATGCCTG ATAAAGTTGC AAAGTACAAT GATGATTATG ATCCAAGATG TTTTGGTGAT ACTTTTCAAG GGATGGGTAT TGCAACTATC CTGATCGAAT CGGGTGGTTA TCCTGGAGAC CCTGAAAAAG AATACATCCG TAAACTGAAT TTTTATGCTC TTTTAAGTGC GCTGAACTCC ATAGCTGATC AGTCTTATCT GAAAGAAGAT GTTGTACAAT ATGAAAAGAT TCCGGAAAAC AACAGGTCTT TATACAACGT GCTGATCCGA AATGTAAAAA TAACCAAACA GGGTAGTGTC TTTTTAACCA ATTTGGGTAT AAACCATACG CAGGTTAAGG ACAGTGATTA CAGGGGAGTT AGTTACCAGG GAAGTATTGA TGAACTGGGC GATGTAGAAA GGGTATATGG TTATGATGAG GCAGATGCCG GAGATTTGAA TTATACGCCT GGTAAATTGA AAATACTGAC AAAAAAAGAG TGGGAGAATT TAAACGCTGA ATCTGAAGTT CAACTGATAA GGGAAGGTTA TTTGTTTATA AAATGGTCGG ATGCAAAGTC GCCCGCAGGT CCGGTAAAAA ACAGGTTGCT GAATCTGACG AATAGTACTA GCGTGTCTGG ACAGGTTGGT TTAAATCAAG CAGCTAACTT TCTGCTTACC AAACAGGATA AGCCGGTTTT TGCAATTATT AATGGTTTTT TACTGAAGTT GGACCAGCCG GCAAAAGTAT TACACAATAC CTTTGGATAT TGA
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Protein sequence | MMKHFFWSKI FLTLLLLCLI QTGFSQDLSF LWDQYGIYRE PALKDRFFKH SDLVPLFQKL EKSGLFKIEI AGGSAQGRSV YHLTAGRGKI KVLLWSQMHG DETTATRALF DFFNFLKAND KNDELRNKLL DQLELHFVPM LNPDGAEMFK RRNALDIDIN RDARMLVSPE ARILMDIAKK IKPDFGFNLH DQSTLYSAGR SKNTATISFL DPAFNYAKDM DDVRKKARQV ILLMNNVLQK LMPDKVAKYN DDYDPRCFGD TFQGMGIATI LIESGGYPGD PEKEYIRKLN FYALLSALNS IADQSYLKED VVQYEKIPEN NRSLYNVLIR NVKITKQGSV FLTNLGINHT QVKDSDYRGV SYQGSIDELG DVERVYGYDE ADAGDLNYTP GKLKILTKKE WENLNAESEV QLIREGYLFI KWSDAKSPAG PVKNRLLNLT NSTSVSGQVG LNQAANFLLT KQDKPVFAII NGFLLKLDQP AKVLHNTFGY
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