Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3030 |
Symbol | |
ID | 8254142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3622243 |
End bp | 3622950 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644936679 |
Product | hypothetical protein |
Protein accession | YP_003093290 |
Protein GI | 255532918 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.862157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00666776 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAGTG AAGAGAAAAT AAGAAGTGCT TTTGAGAATA AAAACTGGCA GGAAATAAAA GTTACAGATT CCTGGCAGAT CTTTAAAATA ATGGCCGAAT TTGTGGATGG TTTCGAGAAA TTAGCTAAAA TTGGACCTTG CGTATCCATA TTTGGTTCGG CTAGGACTGC AGAAACGAAT AAATATTACG AAATAGCTGT CGAATGTGGT AGATTGTTAA CAGAACGTGG GTATGGTGTA ATTACCGGCG GTGGTCCCGG TATTATGGAA GCAGGTAATA AAGGTGCCCA CATGAATGGG GGTAAATCAG TAGGATTAAA TATAGACCTG CCATTTGAAC AGTTCCACAA CAAATATATT GACCACAATA AATTGCTGGA ATTTGATTAC TTTTTTATCA GGAAAGTGAT GTTCATGAAA TACTCTCAGG GCTTTATTGT ATTACCTGGA GGAATGGGCA CTATGGATGA GCTGTTTGAG GCAATTACGC TGATCCAGAC AGGAAAGGTT GCTCGTTTCC CGATCGTGCT GGTTGGAAAG GAATACTGGG GTGGATTGGT AGAATGGATC AAGAATACCA TGCTGCAAAA AGAACATAAT ATTCATGCTG AAGATCTGAA TTTATTTCGC CTGGTAGATA CAGCCGCTGA GGCTGCTGAA CATATTTTCA GGTTCTATGA GAAATATGTA TTGAAACCGA ATTTCTAA
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Protein sequence | MTSEEKIRSA FENKNWQEIK VTDSWQIFKI MAEFVDGFEK LAKIGPCVSI FGSARTAETN KYYEIAVECG RLLTERGYGV ITGGGPGIME AGNKGAHMNG GKSVGLNIDL PFEQFHNKYI DHNKLLEFDY FFIRKVMFMK YSQGFIVLPG GMGTMDELFE AITLIQTGKV ARFPIVLVGK EYWGGLVEWI KNTMLQKEHN IHAEDLNLFR LVDTAAEAAE HIFRFYEKYV LKPNF
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