Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3022 |
Symbol | |
ID | 8254134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3614201 |
End bp | 3615388 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644936671 |
Product | Na+/H+ antiporter NhaA |
Protein accession | YP_003093282 |
Protein GI | 255532910 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.396021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0264038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAT TACTCAACCT ACAGGCATTT AAAGATTTTT TCCGTTCAGG TCAAATTGGT GGGGTAATAT TATTGATTTG TGTGGCAATT TCACTCTTCA TTGCCAATTC ATCTTATGCC ACCGCATTTG CCGATTTTTT AGCTACAGAC TTCGGGTTTA CCTTTGGTGC CAATGCCTAT GTTTTTTCAG TATCTGCCTG GATTAATGAT GCCTTAATGG CTGTATTCTT TTTACTGGTT GGCCTGGAAA TTAAACGTGA AATGGTGGAA GGGGAATTGT CATCGATTAA GAAAGCTTCG CTACCAGTAG TAGCTGCTCT TGGTGGCATG CTGGTACCTG CATTTATCTA TTTTATGTTC AATAAAGGTG AAAATACAGC ATCAGGCTGG GGAATACCTA TGGCTACAGA TATTGCTTTT GCACTGGCCA TTATTTCTAT GCTTGGTAAA CATGTACCTA CCTCTTTAAA AGTATTTCTG GCTGCACTCG CTATTGTTGA CGACCTTGGT GCTATCCTTG TCATCGCTAT TTTTTATACC AATGAAGTGC ATTTTGATTA TTTGCTGATG GCAGCTGGTA TAGTAGCACT GCTGCTGGTC TTCAATTTTT TAAATGTAAA ACCACTTTAC TTTTACCTGA TACCAGGTGT GTTTTTATGG TACTTCATCC ATCACTCGGG AATACATGCC ACCATTGCTG GCGTTTTACT GGCCTTAACC ATCCCCACAA ACAATACGAA TGTTGAATCT CCACTGGAAA AACTGGAACA TCTGCTGAAT GGCCCGGTAA ACTACTTTAT CATGCCTATT TTTGCACTGG CCAATACCAA TATCACTTTT CAGAAAGAAA TGGTCAGCGG ATTGATATCG CCACTTGGTT TTGGAATTAT TACAGGTTTA TTTATAGGAA AAACCATTGG TGTAACCTTG TTTTCATGGG CAGCGGTAAA ACTTAAGCTG GGTAGTTTAC CATCCAGATC TGGCTGGAAA CACATTATTG GTCTGGGTAT GCTTGCTGGT ATTGGCTTTA CCATGTCTAT TTTCATATCC CTTTTATCTT TCAGCGATGT CCTTCATGTT ACAGAAGCGA AGTTTGCTGT GCTCTGCGCT TCTGTACTAT CAGGTATAGC GGGGTTTGTA TTTTTAAAAT CAATCCCCAA AAAGAAACCA GCAGTTAATC CTGCTTAA
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Protein sequence | MAKLLNLQAF KDFFRSGQIG GVILLICVAI SLFIANSSYA TAFADFLATD FGFTFGANAY VFSVSAWIND ALMAVFFLLV GLEIKREMVE GELSSIKKAS LPVVAALGGM LVPAFIYFMF NKGENTASGW GIPMATDIAF ALAIISMLGK HVPTSLKVFL AALAIVDDLG AILVIAIFYT NEVHFDYLLM AAGIVALLLV FNFLNVKPLY FYLIPGVFLW YFIHHSGIHA TIAGVLLALT IPTNNTNVES PLEKLEHLLN GPVNYFIMPI FALANTNITF QKEMVSGLIS PLGFGIITGL FIGKTIGVTL FSWAAVKLKL GSLPSRSGWK HIIGLGMLAG IGFTMSIFIS LLSFSDVLHV TEAKFAVLCA SVLSGIAGFV FLKSIPKKKP AVNPA
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