| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3005 |
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| Symbol | |
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| ID | 8254117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3597464 |
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| End bp | 3598912 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936654 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_003093265 |
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| Protein GI | 255532893 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.425029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAGA AGTACCAATC TGAGTTTCAA AACTGGATTG AAAAAGAAAA GAAAGCTATT
GAGTTGATCA ATATTGTGGG TCAACTATGG TTCGACAGAT CTGTTGAGCT GGTATTGTTC
CGTAAGCCTT TATTTGATGT AGGTAGCAGT GAGATCCTTG CACATCATCA ATATGCCAAA
GAAGTAAGTG GAAAAGACAT TAGCATTTAT GAAACTTTAG AGCTGGCAAC AACCATTGCG
AAATGTAACC TTGCCCCTTC AAGGGTGGAT GTAGGTAGGC TGGCTTCAGA ATGGTTAGCA
GACAATAATA ACTATGCTTC AATCCATGAT TTCATAGTCA CAAAACTTAG CAAACACATC
GGAAAAGACA AAATTAGCCT GAAACCAAAA GACGTTGTAT TATTCGGTTT TGGCCGTATA
GGCAGGATTG CGGCCAGGGA ACTTATCCTG CAGGCGGGCA AAGGGGAACA GCTTCGCTTA
AGGGCAATAG TAACCAGAAG TTATAGTGAT GAAGAACTGA TCAAGAGAGC CGAACTTTTA
CGTACAGATT CCATTCACGG CCCTTTTAAT GGCACTATTA TAGAAGATTT TGAAAACAAA
GCATTAATTG CAAACGGGCA AACCATTCAT TTTATTGAAG CTTCCAGCCC CGAATCAGTA
GATTATACAA CTTACGACAT CAAGGACGCA CTCCTGATAG ACAATACCGG TATTTACCGC
GACCGTGCTG GTCTTAGTAA GCACCTTAAG GCCAAAGGTA TCAGTAAGGT ATTGTTAACC
GCACCAGCCA AAGGTGATAT TCCTAATGTT GTAGCCGGCA TAAACGATAT AGAGGTCGAT
TTCAAAGCTG AAAACATTTT ATCCAATGCT TCATGCACCA CAAATGCAAT AGTTCCTGTC
CTGAAGATAG TTGATGATGC CTTTGGTATC GAAAAGGGTC ATATAGAAAC CGTACACTCC
TATACCAATG ATCAAAACCT GCTTGATAAT TACCATAAAA AATACCGTCG CGGCCGCTCT
GCAGCCTTAA ACCTTGTCAT AACTGAAACC GGGGCAGATA AAGCTGTAGC GAAGGTAATC
CCCCATTTGG GTGGTAAGCT AACAGGTAAT GCCGTACGCG TACCTACGCC CAATGTTTCA
TTGGCTATAT TAAATTTATC TTTAAATAAG GTAACGTCTA AAGAAGAAGT TAGTGAAATT
TTAAGACAGG CATCCTTATT TGGTGATCTT TCAGAACAGA TCGAATATTC CATTTCAAAC
GAATTGGTAA GCACTGACCT GATTGGCAAC AGTCATGCTT CAATTATTGA TGGTCCTGCA
ACTATCATAG CTAAAGACAA TAAATCAATT GTATTATACG CATGGTATGA CAATGAATAT
GGTTATACCA GACAGGTAAT CCGCCTGGCT AAAAAGATGG CGGGTGTAAT CAGGCTAACT
TATTATTAA
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| Protein sequence | MLKKYQSEFQ NWIEKEKKAI ELINIVGQLW FDRSVELVLF RKPLFDVGSS EILAHHQYAK
EVSGKDISIY ETLELATTIA KCNLAPSRVD VGRLASEWLA DNNNYASIHD FIVTKLSKHI
GKDKISLKPK DVVLFGFGRI GRIAARELIL QAGKGEQLRL RAIVTRSYSD EELIKRAELL
RTDSIHGPFN GTIIEDFENK ALIANGQTIH FIEASSPESV DYTTYDIKDA LLIDNTGIYR
DRAGLSKHLK AKGISKVLLT APAKGDIPNV VAGINDIEVD FKAENILSNA SCTTNAIVPV
LKIVDDAFGI EKGHIETVHS YTNDQNLLDN YHKKYRRGRS AALNLVITET GADKAVAKVI
PHLGGKLTGN AVRVPTPNVS LAILNLSLNK VTSKEEVSEI LRQASLFGDL SEQIEYSISN
ELVSTDLIGN SHASIIDGPA TIIAKDNKSI VLYAWYDNEY GYTRQVIRLA KKMAGVIRLT
YY
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