Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3001 |
Symbol | |
ID | 8254113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3593364 |
End bp | 3594752 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936650 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_003093261 |
Protein GI | 255532889 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0472874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.642083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTACG ATTTAATTGT AATAGGCAGC GGTCCGGGTG GATACGTAGC TGCGATCAGA GCTTCTCAGT TAGGTTTGAA AACTGCGGTA GTTGAGCGCG AATCTTTAGG TGGAATATGC CTGAACTGGG GCTGTATACC AACCAAAGCA TTGTTAAAAA GCGCTCAGGT ATTTGAATAC ATCAATCATG CTGCAGAGTA TGGAATTAAA ACTGCTGAAG CCGAAGCAGA CTTTGCTGCT GTGATTAAAC GCAGTCGGGG TGTTGCAGAT GGCATGAGTA AGGGTGTTCA GTTCCTGATG AAAAAGAACA AGATTGATGT GATCATGGGC ACTGGCAAAG TTAAGCCAGG CAACAAGGTA GAAGTTAAAG CTGCTGACGG ATCACAAAAA GAATATACAG CAACAAGTAT TATACTGGCT ACCGGTGGAA GATCAAGAGA ATTGCCGAAC CTGAAACAGG ATGGCAAAAA AGTGATTGGA TACCGACAGG CAATGGTATT GCCTGAGCAG CCAAAATCGA TGGTTGTGGT GGGGTCTGGT GCTATTGGTG TAGAATTTGC TTATTTTTAT GCTACTTTAG GCACTAAGGT TACTGTTGTA GAATTTATGG ACAATGTAGT ACCTGTTGAA GATGAGGATG TATCTAAACA GTTGCTGCGC AGCTTCAAAA AAGCAGGAAT TGAAGTGATG ACCTCTTCAA GCGTTGAATC TGTAGACACC AGTGGTAGCG GCTGCAAGGT TCAGGTTAAA ACTGCTTCAG GTATGCAAAC TTTAGAATGC GATATCGTCC TTTCTGCAGC AGGTGTGGTA GCAAACATTG AAAATATTGG CCTGGAAGAA ACAGGCATAA AAACCGAAAA AGGTAAGGTA GTTGTAGATG AGTTTTACAA TACTTCTGTA AAAGGTGTTT ATGCAATTGG TGATATTGTT GGCGGACAGG CGCTGGCACA CGTTGCTTCG GCAGAAGGCA TTATCTGTGT AGAAAAAATT GCTGGTCATA AACCAGAGCC TTTGGATTAT AACAACATCC CTGGATGTAC TTATTGCAGT CCTGAGATTG CTTCTGTAGG TTATACGGAA AAAGCAGCTA AAGCGGCAGG ATATGAATTG AAGATCGGTA AATTCCCATT CTCTGCTTCT GGTAAAGCCA GTGCTGCAGG TGCCAAGGAT GGTTTTGTAA AACTAATCTT TGATGCAAAA TATGGCGAAT TATTAGGCGC ACACATGATT GGCGCCAATG TAACTGAAAT GATTGCCGAG ATTGTGGTTG CGCGTAAGCT CGAAACAACA GGCCACGAAA TGATTAAATC GGTACATCCA CATCCAACCA TGAGCGAAGC AATTATGGAA GCTGCAGCTG ATGCGTATGG AGAGGTAATT CATTTGTAA
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Protein sequence | MNYDLIVIGS GPGGYVAAIR ASQLGLKTAV VERESLGGIC LNWGCIPTKA LLKSAQVFEY INHAAEYGIK TAEAEADFAA VIKRSRGVAD GMSKGVQFLM KKNKIDVIMG TGKVKPGNKV EVKAADGSQK EYTATSIILA TGGRSRELPN LKQDGKKVIG YRQAMVLPEQ PKSMVVVGSG AIGVEFAYFY ATLGTKVTVV EFMDNVVPVE DEDVSKQLLR SFKKAGIEVM TSSSVESVDT SGSGCKVQVK TASGMQTLEC DIVLSAAGVV ANIENIGLEE TGIKTEKGKV VVDEFYNTSV KGVYAIGDIV GGQALAHVAS AEGIICVEKI AGHKPEPLDY NNIPGCTYCS PEIASVGYTE KAAKAAGYEL KIGKFPFSAS GKASAAGAKD GFVKLIFDAK YGELLGAHMI GANVTEMIAE IVVARKLETT GHEMIKSVHP HPTMSEAIME AAADAYGEVI HL
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