Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2928 |
Symbol | |
ID | 8254039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3493026 |
End bp | 3493661 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936576 |
Product | Peroxidase |
Protein accession | YP_003093188 |
Protein GI | 255532816 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.625084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00123235 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTTAA GAATAGGGGA CACCGCTCCC AATTTTAAAG CAGACACTTC TATCGGTGAA ATTGATTTCT ATGAATTCTT AGGGGACAGC TGGGGTGTTT TGTTTTCCCA CCCGGCAGAT TATACACCGG TATGTACAAC TGAGCTTGGC CGTACCTCGG CTTTGAAATC GGAATTTGAA AAAAGAAATG TTAAAGTACT GGCCTTAAGC GTAGATTCAG CAGAATCGCA TAAAGGATGG ATCAAGGACA TCAACGAAAC CCAAAATACC GAGGTCGATT TTCCGATCAT CGCTGATGAG GATAAAAAAG TGGCTGATCT GTATGACATG ATCCACCCTA ATGCATCCGA GACCTTAACC GTGCGTTCTT TGTTCATCAT ATCACCGGAT AAGAAAGTAA AACTGATGCT GACTTACCCT GCTTCTACAG GACGTAATTT CAATGAAGTA CTCAGGGTAA TCGATTCCCT GCAGCTTACC GCCAAGTATA GCGTGGCTAC ACCGGCCGAC TGGGAAGATG GCCAGGATGT GGTGGTCATG AACAGCATTA AAACTGAGGA TATTCCTGCA AAATTCCCTA AAGGGCATAA AGTGATCAAA CCTTACCTGA GGACAACCCC TCAGCCAAAT AAGTAA
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Protein sequence | MSLRIGDTAP NFKADTSIGE IDFYEFLGDS WGVLFSHPAD YTPVCTTELG RTSALKSEFE KRNVKVLALS VDSAESHKGW IKDINETQNT EVDFPIIADE DKKVADLYDM IHPNASETLT VRSLFIISPD KKVKLMLTYP ASTGRNFNEV LRVIDSLQLT AKYSVATPAD WEDGQDVVVM NSIKTEDIPA KFPKGHKVIK PYLRTTPQPN K
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