Gene Phep_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2928 
Symbol 
ID8254039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3493026 
End bp3493661 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content44% 
IMG OID644936576 
ProductPeroxidase 
Protein accessionYP_003093188 
Protein GI255532816 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.625084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00123235 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTTAA GAATAGGGGA CACCGCTCCC AATTTTAAAG CAGACACTTC TATCGGTGAA 
ATTGATTTCT ATGAATTCTT AGGGGACAGC TGGGGTGTTT TGTTTTCCCA CCCGGCAGAT
TATACACCGG TATGTACAAC TGAGCTTGGC CGTACCTCGG CTTTGAAATC GGAATTTGAA
AAAAGAAATG TTAAAGTACT GGCCTTAAGC GTAGATTCAG CAGAATCGCA TAAAGGATGG
ATCAAGGACA TCAACGAAAC CCAAAATACC GAGGTCGATT TTCCGATCAT CGCTGATGAG
GATAAAAAAG TGGCTGATCT GTATGACATG ATCCACCCTA ATGCATCCGA GACCTTAACC
GTGCGTTCTT TGTTCATCAT ATCACCGGAT AAGAAAGTAA AACTGATGCT GACTTACCCT
GCTTCTACAG GACGTAATTT CAATGAAGTA CTCAGGGTAA TCGATTCCCT GCAGCTTACC
GCCAAGTATA GCGTGGCTAC ACCGGCCGAC TGGGAAGATG GCCAGGATGT GGTGGTCATG
AACAGCATTA AAACTGAGGA TATTCCTGCA AAATTCCCTA AAGGGCATAA AGTGATCAAA
CCTTACCTGA GGACAACCCC TCAGCCAAAT AAGTAA
 
Protein sequence
MSLRIGDTAP NFKADTSIGE IDFYEFLGDS WGVLFSHPAD YTPVCTTELG RTSALKSEFE 
KRNVKVLALS VDSAESHKGW IKDINETQNT EVDFPIIADE DKKVADLYDM IHPNASETLT
VRSLFIISPD KKVKLMLTYP ASTGRNFNEV LRVIDSLQLT AKYSVATPAD WEDGQDVVVM
NSIKTEDIPA KFPKGHKVIK PYLRTTPQPN K