Gene Phep_2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2851 
Symbol 
ID8253959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3398992 
End bp3400263 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content36% 
IMG OID644936497 
ProductSMC domain protein 
Protein accessionYP_003093112 
Protein GI255532740 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0808223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAT CAATTAAAAT AAAAAACTTT AAGTCGGTTC AGGATCTTGA AATTGAACTG 
GGAAGAGTTA ATGTATTTAT AGGCGAGAAT GGCTGTGGTA AAACATCGAT ACTTGAAGCT
ATTGGCATGG GCACTGCTGC TTTTTCAAAC GAATTGAACC AAAGTGTGCT ATTTAACAAG
GGGATTCGGG TTACCGAGGG CAATTTAATG CGGTCTGCGT TTGATACGTC TAAAGGTAAT
ACTCCTATTC ATATTGGACT TACAAACCAG GCCGGTAATA ATCTTGCATA TGATATTGCC
GTTTCAGGTA AAAGTTTTGA AATCAACAAG GCATATTCAA ATATAGATGA GCAAGAGCCA
AGGCGTAGAA TGTACGAGGA GATTTTAGGC ATCCTTAATA AGAACAAAAG GTTGCAAAAA
GAGATTGCTT CCGAACTCAA CAAAAGAAAA AAGACAAATC AAGTTAAGGA AGATCATGCC
TTTATTGAGA AGAAATTCCA AGAAGATCTT GAAATAATAC TTAAAAGTAG TATTGATTTA
GATAACGATT CTAATTATTG GCGGAAATAC ATTTATTTAA GTAATAACAG AACAAAGCTG
GAAGGTTTCG ATGTAGACGA TTATATGATT TATACTCCTG AAAATCATTT TTTGAGACGA
TTTGAGGACG AAGGACAAAT TTTGCCTATA GGCAAACAAG GTGAAGGGCT TTTTAAACAT
CTTGTTGAGC TGTTTAAAAA TGACGACAGC TTTGCTGAAG ATATTTGTAA ACAGCTAAAG
CTAATCAACT GGTTTGATGG TTTGGAGATC CCATCTGATC TGGCATTTAC CGAAATGAGG
TTGAATATCA AAGACCGGTT TATTAAGGAG AATATTGAAT ATTTTGATCA GCGCAGTGCA
AATGAAGGTT TTTTATACCT GCTGTTTTAT TTTACTTTGT TTTTGAGCAA GGAAACACCT
CGATTTTTCG CAGTAGACAA CATAGATAAT GCGCTAAACC CTAAGTTGTG TAGGGAGTTG
ATTAACCGGT TAACTGAATT GGCAAAGGAA AAGAAAAAGC AGGTTATTCT TACTACGCAT
AATCCGGCAA TATTAGATGG TTTGGACCTA AAGGATGATG AACAGCGCCT GTTTGTGGTT
TATAGAAATG CGGATGGACA CACCAAGGCG AAAAGGGTCC CCCCCCCGAA GGATATTGAT
GGAATTGAAA CAGTGCGACT TTCTGAAGCT TTTATCAGAG GATATATTGG AGGATTACCA
AAAAATTTTT AA
 
Protein sequence
MLKSIKIKNF KSVQDLEIEL GRVNVFIGEN GCGKTSILEA IGMGTAAFSN ELNQSVLFNK 
GIRVTEGNLM RSAFDTSKGN TPIHIGLTNQ AGNNLAYDIA VSGKSFEINK AYSNIDEQEP
RRRMYEEILG ILNKNKRLQK EIASELNKRK KTNQVKEDHA FIEKKFQEDL EIILKSSIDL
DNDSNYWRKY IYLSNNRTKL EGFDVDDYMI YTPENHFLRR FEDEGQILPI GKQGEGLFKH
LVELFKNDDS FAEDICKQLK LINWFDGLEI PSDLAFTEMR LNIKDRFIKE NIEYFDQRSA
NEGFLYLLFY FTLFLSKETP RFFAVDNIDN ALNPKLCREL INRLTELAKE KKKQVILTTH
NPAILDGLDL KDDEQRLFVV YRNADGHTKA KRVPPPKDID GIETVRLSEA FIRGYIGGLP
KNF