Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2851 |
Symbol | |
ID | 8253959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3398992 |
End bp | 3400263 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644936497 |
Product | SMC domain protein |
Protein accession | YP_003093112 |
Protein GI | 255532740 |
COG category | [R] General function prediction only |
COG ID | [COG4637] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0808223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAT CAATTAAAAT AAAAAACTTT AAGTCGGTTC AGGATCTTGA AATTGAACTG GGAAGAGTTA ATGTATTTAT AGGCGAGAAT GGCTGTGGTA AAACATCGAT ACTTGAAGCT ATTGGCATGG GCACTGCTGC TTTTTCAAAC GAATTGAACC AAAGTGTGCT ATTTAACAAG GGGATTCGGG TTACCGAGGG CAATTTAATG CGGTCTGCGT TTGATACGTC TAAAGGTAAT ACTCCTATTC ATATTGGACT TACAAACCAG GCCGGTAATA ATCTTGCATA TGATATTGCC GTTTCAGGTA AAAGTTTTGA AATCAACAAG GCATATTCAA ATATAGATGA GCAAGAGCCA AGGCGTAGAA TGTACGAGGA GATTTTAGGC ATCCTTAATA AGAACAAAAG GTTGCAAAAA GAGATTGCTT CCGAACTCAA CAAAAGAAAA AAGACAAATC AAGTTAAGGA AGATCATGCC TTTATTGAGA AGAAATTCCA AGAAGATCTT GAAATAATAC TTAAAAGTAG TATTGATTTA GATAACGATT CTAATTATTG GCGGAAATAC ATTTATTTAA GTAATAACAG AACAAAGCTG GAAGGTTTCG ATGTAGACGA TTATATGATT TATACTCCTG AAAATCATTT TTTGAGACGA TTTGAGGACG AAGGACAAAT TTTGCCTATA GGCAAACAAG GTGAAGGGCT TTTTAAACAT CTTGTTGAGC TGTTTAAAAA TGACGACAGC TTTGCTGAAG ATATTTGTAA ACAGCTAAAG CTAATCAACT GGTTTGATGG TTTGGAGATC CCATCTGATC TGGCATTTAC CGAAATGAGG TTGAATATCA AAGACCGGTT TATTAAGGAG AATATTGAAT ATTTTGATCA GCGCAGTGCA AATGAAGGTT TTTTATACCT GCTGTTTTAT TTTACTTTGT TTTTGAGCAA GGAAACACCT CGATTTTTCG CAGTAGACAA CATAGATAAT GCGCTAAACC CTAAGTTGTG TAGGGAGTTG ATTAACCGGT TAACTGAATT GGCAAAGGAA AAGAAAAAGC AGGTTATTCT TACTACGCAT AATCCGGCAA TATTAGATGG TTTGGACCTA AAGGATGATG AACAGCGCCT GTTTGTGGTT TATAGAAATG CGGATGGACA CACCAAGGCG AAAAGGGTCC CCCCCCCGAA GGATATTGAT GGAATTGAAA CAGTGCGACT TTCTGAAGCT TTTATCAGAG GATATATTGG AGGATTACCA AAAAATTTTT AA
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Protein sequence | MLKSIKIKNF KSVQDLEIEL GRVNVFIGEN GCGKTSILEA IGMGTAAFSN ELNQSVLFNK GIRVTEGNLM RSAFDTSKGN TPIHIGLTNQ AGNNLAYDIA VSGKSFEINK AYSNIDEQEP RRRMYEEILG ILNKNKRLQK EIASELNKRK KTNQVKEDHA FIEKKFQEDL EIILKSSIDL DNDSNYWRKY IYLSNNRTKL EGFDVDDYMI YTPENHFLRR FEDEGQILPI GKQGEGLFKH LVELFKNDDS FAEDICKQLK LINWFDGLEI PSDLAFTEMR LNIKDRFIKE NIEYFDQRSA NEGFLYLLFY FTLFLSKETP RFFAVDNIDN ALNPKLCREL INRLTELAKE KKKQVILTTH NPAILDGLDL KDDEQRLFVV YRNADGHTKA KRVPPPKDID GIETVRLSEA FIRGYIGGLP KNF
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