Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2844 |
Symbol | |
ID | 8253952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3390399 |
End bp | 3393548 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644936490 |
Product | TonB-dependent receptor plug |
Protein accession | YP_003093105 |
Protein GI | 255532733 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0308966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA CATTACTTTT AATTCTGTTT CTGTTTATCT GCACATTTAC TTATGCGCAG GAAACCATCA CCGTTACTGG TGTAGTAACA GATGGAACTA ATCAGCCGAT GCCCGGTGCG ACGGTAATGG AGCGGACCAC CTCAAATGCT GTGATAACTG CTAATAACGG GAGTTATCAG ATCAAGGTAA AATCGAATGC CATATTGGTA TTTAGTTATC TGGGCAGTAA AACGGTTGAA GTTCAGGTAA AGGACAGGAA AACCATTAAT GTAAAGTTAC TTGACGATCA GAATAACCTG AACGAAGTTG TAATTACTGG TTATGGACAG GCCGTTCAGC GGAAAGACCT TACCGGGGCA GTATCATCAA TAAGTGGTAC TGAACTGGCA AAAGTGCCAG TGCAAAACGT AGCCCAGGCC TTGCAGGGAC GTATCGCCGG TATGCAGGTA ACGATGGCAG ACGGAACTCC CGGTGCGGCT CCTTCAATGA AAATACGCGG AGGAACCTCT ATCACGCAAA GCAATGAGCC ATTGTATGTG GTAGATGGTG TGCCGCAAAC TGATGGGCTT GATTTTTTAG ACCCAATGGA CATTGAATCA GTTGATGTAC TGAAGGATGC TTCATCAACG GCGATTTATG GTGCCAGAGG AGCTAACGGT GTAGTTTTAA TAACTACCAA GCAGATCAAA GGAGGAGGGC TTAAAGTTAA CTATGATGGA TATGTAGGGG CAAAAAAAAT CACGACCTAT TTACCGGTAT TAAATGCCTA CGATTATGCT TTTTTACTTT ATGAAAGAGC AATTGGAAGG GGCGGCGACA GATTGCCGGC ATTTGAAGCA AACTATGGCA CGTTTGCAGA CCTGGAAAAA AATTATGGCA ACAGGCCTGG TATAGATTGG CAGAAAGAAG TTTTTGGGCA CACGGTGATG AACCAGTACC ATAAGTTTAG CATCAGTGGC GGTGGAAACG ATACCAGGTT CAATATTTTT TACTCAAAAA ACATAGATGA GGGAATTATG CTGGGCAGTG GTTCTGATAA AAACATTGCT AAACTAACTG TGAGCCATAA TTTAAGTAAA AAGTTCAGTA TCAATGCCAT TGTGAACTAT TCCAATCAAA AGCTAACTGG CATTGGAACA CAGGAAGGCG GAACTTCGAG GTTTAACTAC CTTCAAAACC TCTTTCAGTA TCGTCCCACA AATGGTATTA AAGGTCTGGA TGATGAACTG ATAGATCTGG ACCTGGATCC TTTAGATCCA AACCAAAGCT CCCCTTCTTT TCAAAGCCCG CTGGTAGCCA TTGAATCCAA TCCAAGAGAC AGGAAGAAAA AGACATTAAA TGTAAATGCT TCCCTTCAGT ATAACATTAT TAAAAACCTG ACCTATCGTG GTCTTGTCAG TTATACTGAT GGCAGCGATA AGGCCAAGAG TTTTACTACA ACTGAGAATT TGGCTGCCCG GCGTACAGGA GGACCTTTTG GCTCTATTTC TGATGCACTT GCCAACCGCT TTAATTATAA CAACACGCTT ACTTACAGCA ATACTTTTAA CAAGATACAT AAGCTGGATG CAACCATAGG ACAGGAATAT ATTTATAACT ATACCGAGCG CTTTGGCGTA AGTACCAGTG CTTTCCCGAA CGTAAATTTA GGCTGGGATA AACTGGAATT AGGTACACTT CCGGGTATTC CGACTTCCTT TGCAGAAGAT GACAAATTAT TTTCTCTTTT TGGGAGGCTG AATTACAGCT ATAAAGGAAA GTATCTTTTA ACTTCAAGTT TGAGGTATGA TGGCTCTTCC AAATTCGGCG AAGAAAATAT CTGGGGAATA TTCCCTTCGG CGGCGGTAGC CTGGAGAATT GTGGAAGAGG ATTTTATGAA AAAATTTAAA GCTATATCAG ATCTGAAATT GCGTTTAAGT TATGGTTCAT CTGGAAATAA CCGCATTGGT AACTACCAGG CATTGGGCAT TTTTGGAACT TCAAGTTACC CCTTAAACAA TCAGCTGGTA ACTTCTGCAG GCCAGCTTAA CTTACCTAAT CCTTCACTGA AATGGGAAGC AAACCAATCC TTTAACCTTG GTCTGGATCT GGGCCTTTTT AAGCAAAGAG TGTCTTTCAC AGCTGAGCTG TACGATAATC GTTCGAAAGA CCTGCTGTAT CGTTCCCGTA TTCCGGCGAG TTCAGGTTTT ACGGAACAAT TTAGAAACAT CGGCACAACC TCGAGCAGGG GTATTGAATT TACTTTAAAT ACCATCAATG TAAGAAACAA TAGTTTCAAC TGGAGCAGTA ACTTTAATAT TGCTTTTAAC AAAACCAAGG TACTGGGTTT AAGTGAGGGG GAAAATTCCA TGCTAACAAA TAGCTGGACC ACTACCAATG ATTATATACT GCAGGTTGGT CAGCCGGTGG GTATCATGTA TGGCTACAAG CAAGCAGGCC TGTACCAGGT GGATGACTTT GATTTTAACG CAGCAAACAA CACTTATACT TTAAAAAGCG GTGTAGTAAC GGATGTCGCA GTAGTGCAGC CGGGTTATAT CAAATTTGCC GACTTAAATA ATGACGGCAA AATAGACGAC AATGACAGAA CAGCAATAGG AAATGCCAAT GCCAAGTTTT CCGGAGGTTT AAATAATACC TTCAGTTATA AAGGGTTTGA CCTCAGTGTT TTTGTTGACT TTACCTATGG GAATGACATC TATAATGCGA ACAAGCTGAA CAATTCTGCA TTGTTTAACG ATTATGCAAG TACTTTTGCC TATTTCAAAG ACAGGTGGAA GATCGTCAAT GCAGCTGGCC AGCGGATACT GGACCCTGTA GAACTTGCCA ATGCCAATAG TGGGAAAACA ATTCCGGTTT TTGACGGTGC AACAGCCAAA CGTTTACATG ATACTATGAT TGAGGACGGT TCCTTCTTGC GCATCAATAA CATCAGCCTC GGTTATACCC TTCCTAAAAG CTGGTTAAGC AAGGTTAAAA TAGCCAATGC CCGTTTGTAT GTAACTGCAT ATAACCTGCA TGTATTTACA AATTACAGTG GCTATGATCC GGAGGTAAGC GTATTCAGCG ATCCGCTTAC GCCAGGAGTA GATTTTAGCG CTTACCCAAG GGCAAAATCA TTTGTTGCAG GTCTTAACGT ATCCTTTTAA
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Protein sequence | MKRTLLLILF LFICTFTYAQ ETITVTGVVT DGTNQPMPGA TVMERTTSNA VITANNGSYQ IKVKSNAILV FSYLGSKTVE VQVKDRKTIN VKLLDDQNNL NEVVITGYGQ AVQRKDLTGA VSSISGTELA KVPVQNVAQA LQGRIAGMQV TMADGTPGAA PSMKIRGGTS ITQSNEPLYV VDGVPQTDGL DFLDPMDIES VDVLKDASST AIYGARGANG VVLITTKQIK GGGLKVNYDG YVGAKKITTY LPVLNAYDYA FLLYERAIGR GGDRLPAFEA NYGTFADLEK NYGNRPGIDW QKEVFGHTVM NQYHKFSISG GGNDTRFNIF YSKNIDEGIM LGSGSDKNIA KLTVSHNLSK KFSINAIVNY SNQKLTGIGT QEGGTSRFNY LQNLFQYRPT NGIKGLDDEL IDLDLDPLDP NQSSPSFQSP LVAIESNPRD RKKKTLNVNA SLQYNIIKNL TYRGLVSYTD GSDKAKSFTT TENLAARRTG GPFGSISDAL ANRFNYNNTL TYSNTFNKIH KLDATIGQEY IYNYTERFGV STSAFPNVNL GWDKLELGTL PGIPTSFAED DKLFSLFGRL NYSYKGKYLL TSSLRYDGSS KFGEENIWGI FPSAAVAWRI VEEDFMKKFK AISDLKLRLS YGSSGNNRIG NYQALGIFGT SSYPLNNQLV TSAGQLNLPN PSLKWEANQS FNLGLDLGLF KQRVSFTAEL YDNRSKDLLY RSRIPASSGF TEQFRNIGTT SSRGIEFTLN TINVRNNSFN WSSNFNIAFN KTKVLGLSEG ENSMLTNSWT TTNDYILQVG QPVGIMYGYK QAGLYQVDDF DFNAANNTYT LKSGVVTDVA VVQPGYIKFA DLNNDGKIDD NDRTAIGNAN AKFSGGLNNT FSYKGFDLSV FVDFTYGNDI YNANKLNNSA LFNDYASTFA YFKDRWKIVN AAGQRILDPV ELANANSGKT IPVFDGATAK RLHDTMIEDG SFLRINNISL GYTLPKSWLS KVKIANARLY VTAYNLHVFT NYSGYDPEVS VFSDPLTPGV DFSAYPRAKS FVAGLNVSF
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