| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2839 |
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| Symbol | |
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| ID | 8253947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3381376 |
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| End bp | 3382590 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936485 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003093100 |
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| Protein GI | 255532728 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00286392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATAAAA AACCGATAAT AAACAAATTG ATAGTGGTTG CTTGTGCTGG TTTGGCATTA
GGTTTAACCC TGGCTTGTGC AAAACCAACT GCTCAACTTA CAGATGAGAA AATTGCTTCG
ATTTTTGAAT TGGAGAAGAT ATATGCCGAC AATGCCTTTA AAATCGTAAA ATCGACCGGT
AAAATGCCGC GTTCATTAGA GAAAGGTTTT CAACCTATTT CTGACTGGAC CAGCGGCTTT
TATCCTGGAA ATTTGTGGCT GGTGTATGAA TTTACCAGGG ACAAAGACAT CCTTAAAAAA
GCCGAATATG CTACGGCCCT GGTAGAGGAC AATAAGGACT ATACGCATGA CCATGATATT
GGTTTCATGA TTTATAGCAG TTATGGCAAT GGGTACCGGC TTACTAAAAA TGAAAAATAC
AAAGCAGTGA TGATTGAGGC CTCTAAATCG GCCATTAAAA GGTATAATCC TAAAGTGAAA
TCAATTATGT CCTGGAATCC CAGTGCAGCA CGGGACTGGA AATTTCCGGT AATTATCGAC
AATATGATAA ATCTGGAACT GTTACTGAAT GGGACCGGAT TTACCGGTGA CAGTACTTAT
TACAATGTAG CGGTTAATCA TGCCAATACG ACCATGAAAA ACCAGTACAG GTCAGACTAC
AGTTGTTCGC ATGTCGTAGA TTATGACCCG CTTACAGGAA AAATGCGTAA ACGTGACTGG
AACAATGGAG ATAGCAACCC TGAAACCGCG TCCTGGAGCC GTGGCCAGAG CTGGGGGTTG
TATGGGTTTG GATTTATGTA TAAATACACA CATAAAAAAG AGTATTTAAC CCAGGCAGAA
AATATAGCTG CATATATTCT AAACAATCAG AATATGCCTG AAGATATGGT ACCTTACTGG
GATTATCGCG CACCGAAAAT CCCTACCCAG AAAGATGCCT CGGCAGCTGC ATTGCTTGCA
TCAGGCTTAA TGCAGCTTGC AGAATTGTCA CCGGCCAATG GCAAAAAGTA CTTTAAAGCG
GGCGAAAAAA TTCTGGAAAG CCTTTCTGCC GCACCTTACC TGAACGAGAG TGGCAAAGGC
AATTATCTAC TGAACCATGC TACCGGTAAT TTCTTAAGAA AATCTGAAGT AGATGGCGGT
CTGATATATG CAGATTATTA TTATTTAGAA GCTTTATTGA GGTATCAGAA ATTGAAGCAA
AAAATTGAAT TTTAA
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| Protein sequence | MNKKPIINKL IVVACAGLAL GLTLACAKPT AQLTDEKIAS IFELEKIYAD NAFKIVKSTG
KMPRSLEKGF QPISDWTSGF YPGNLWLVYE FTRDKDILKK AEYATALVED NKDYTHDHDI
GFMIYSSYGN GYRLTKNEKY KAVMIEASKS AIKRYNPKVK SIMSWNPSAA RDWKFPVIID
NMINLELLLN GTGFTGDSTY YNVAVNHANT TMKNQYRSDY SCSHVVDYDP LTGKMRKRDW
NNGDSNPETA SWSRGQSWGL YGFGFMYKYT HKKEYLTQAE NIAAYILNNQ NMPEDMVPYW
DYRAPKIPTQ KDASAAALLA SGLMQLAELS PANGKKYFKA GEKILESLSA APYLNESGKG
NYLLNHATGN FLRKSEVDGG LIYADYYYLE ALLRYQKLKQ KIEF
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