Gene Phep_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2812 
Symbol 
ID8253920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3330396 
End bp3332009 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content46% 
IMG OID644936458 
ProductL-fucose isomerase _2 domain protein 
Protein accessionYP_003093073 
Protein GI255532701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGGG TAAATAGAGA AATTATTCTG GTTTCAAGTG GTGATCTGAG ACTGTCGGCA 
AATCAAAATT GCTGGGAAGC ACAGTCGCAA ATGGAGCGCG ACCTGACTAC AGCTATTGGT
AAGTTAGGCT GGACAGTAAG ACGCGCCCAT GCTTATGATG CCAATAAAAA ACACGGCTTC
ATTGATTCCC AAAGAATGGG AATGGATGTA TTCCGGAACA TCAACCCCGA ACAACCTTTA
ATTGTTGCCG AAAGTGTTTG GCAATATTCA CATCACGTAT TTGCCGGGTT AACCACGCAC
AGCGGGCCTA TATTAACGGT AGCCAACTGG AGCGGACAAT GGCCGGGCCT GGTAGGTATG
CTAAATTTAA ATGGCTGCTT AACAAAGGCC GGTGTAAACT ATAGCACGCT GTGGTCTGAG
CAGTTTACCG ATGATTTTTT TATTGCCGGT TTAAACGAAT GGCTGGCTAC AGGTAAAGTA
AGCCATAACT TAAGCCATGT AAAGAGCTTG GCACTCCATA AAATTCCATT TAGTGAAGAA
GAGCAGGGCA GAAGTTTTGC CAGAAAGCTG AAAGAAAGAA AAGTGATCAT GGGTGTATTT
GATGAGGGCT GCATGGGCAT GTACAATGCC ATTGTGCCTG ATGAATTGTT GCATCCAACA
GGTTTTTTTA AAGAAAGGTT AAGCCAGTCG GCACTCTATG CAGCCATGAA CCGTGTTAAG
GATAGTGAAG CAGAGGCTGT TTTAAATTGG TTGCTGGATA AAGGTATGCA GTTTAACTGG
GGCGAGAACC CTGAGGCCGA GCTTACCCGG GCGCAAAGTA TGGAGCAATG CAAAATGTAC
ATTGCGGCTG TACACATTGC TGATGAGTTT GGCTGTGATA CCATTGGCAT CCAATACCAG
CAGGGATTAA AAGACCTTAC CGTGGCAAGC GACCTGGTAG AAGGTTTATT GAATAATGAA
GACAGGCCTC CTGTATATTC AGAAGGCGGT AAGGAACTAT ATGCAGGCAA AGCATTGCCC
CATTTTAATG AGGTAGATGA ATGTGCCGGA ATTGATGCTT TGCTCACTTA CAATTTATGG
AAGGAACTGG GCATGGAAGG AGAGAATACT TTACATGACA TCAGATGGGG AGAGCATTAT
AAAGGTGCAG GTATAGATGA TTTTGTATGG TTGTTCCTGA TTTCGGGTGC TGCACCTGCA
GCGCATTTTG TGGGGGGCTA TGCTGGTGCA AGTAGCGACA GGCAGCCGCC AATGTATTTC
CGTTTGGGTG GGGGCACCCT TAAGGGCATC AGTAAACCAG GTGCAATTGT ATGGAGCAGG
GTGTACGTAA TGAACAATGA GCTGCATTGC GATTTAGGGG TAGGCGAGGT AGTTGCCTTG
CCGGAAGAAG AAACTTACAG ACGCTGGAAC AATACCACGC CTGAATGGCC CATTATGAAT
GCCGTATTAA AAGGTGTAAG CAGGGACCAG TTAATGGGGC GTCACAAAGC AAACCACATC
CATGTTGTCT ATACGCCTGA TGAGGCTGCA GCGCATAAAG CATGTTGTAT TAAAGCGGCA
GCGATGGATG AATTGGGTTT GAAGGTGCAT TTTTGCGGAG AGGTAAACCT ATAG
 
Protein sequence
MQGVNREIIL VSSGDLRLSA NQNCWEAQSQ MERDLTTAIG KLGWTVRRAH AYDANKKHGF 
IDSQRMGMDV FRNINPEQPL IVAESVWQYS HHVFAGLTTH SGPILTVANW SGQWPGLVGM
LNLNGCLTKA GVNYSTLWSE QFTDDFFIAG LNEWLATGKV SHNLSHVKSL ALHKIPFSEE
EQGRSFARKL KERKVIMGVF DEGCMGMYNA IVPDELLHPT GFFKERLSQS ALYAAMNRVK
DSEAEAVLNW LLDKGMQFNW GENPEAELTR AQSMEQCKMY IAAVHIADEF GCDTIGIQYQ
QGLKDLTVAS DLVEGLLNNE DRPPVYSEGG KELYAGKALP HFNEVDECAG IDALLTYNLW
KELGMEGENT LHDIRWGEHY KGAGIDDFVW LFLISGAAPA AHFVGGYAGA SSDRQPPMYF
RLGGGTLKGI SKPGAIVWSR VYVMNNELHC DLGVGEVVAL PEEETYRRWN NTTPEWPIMN
AVLKGVSRDQ LMGRHKANHI HVVYTPDEAA AHKACCIKAA AMDELGLKVH FCGEVNL