Gene Phep_2797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2797 
Symbol 
ID8253905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3311957 
End bp3312721 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content43% 
IMG OID644936443 
Productregulatory protein DeoR 
Protein accessionYP_003093058 
Protein GI255532686 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCTA ATCAACGAAA AGACAAGATA CTGGAACTGT TAAAAGAGGA TGGATCTGCA 
AAGGTGGTAA ACCTTGCAAA ACTCTTTAAA GTAACAGAAG TGACCATCCG GCAGGACCTG
GAAAAACTGG AAAAAGAAGG TCTGGTACTT AGGGAACACG GTGGTGCCTT TTTAAAGAAC
ATGGAAAACC AGGTGCGCAC ATTTTCCTTA AGCCATCAGG ACCACCTGGA CAAAAAGGAA
TTGATCGCAA AAAAATGCCT CGAATTTATA GAAGCAGGAG ATACCATTAT CCTCGACTCG
GGCTCTACTA CTACCGAAAT CGCTAAAAAA CTAAAAGGAA TTAAAAATTT AACGGTCATA
ACCAATGCCT TAAATATTGC TTTGCTGCTG GGTGTAGAAC CCGGAATTGA AGTAATCATG
ACAGGTGGAG AATTTAAGCC ACCTACCCTA TCGTTAACGG GACAAAAGGC CGCCGATTTT
TTTAACGGGC TAAACGTGCA TAAACTTTTT CTTGCCACAG CCGGCCTGTC ACTCAAAGCC
GGGTTAACCT ACCCGAGCAT TAGCGACCTG GTGGTGAAAA AGGCAATGAT CAACGCAGCC
GAGACCACTT ATTTAGTGGC AGATTCTACC AAAATCGGGA AAAGCTCTCT GGCCAGCCTG
GGTGCATTGT CGCTCATAGA TTACATCATT ACTGATGCAG GCATACAGGA AAAATATAAG
AACTTATTAA ACGAAAACGA AATAGAGCTG ATCATAGCAG ACTGA
 
Protein sequence
MLANQRKDKI LELLKEDGSA KVVNLAKLFK VTEVTIRQDL EKLEKEGLVL REHGGAFLKN 
MENQVRTFSL SHQDHLDKKE LIAKKCLEFI EAGDTIILDS GSTTTEIAKK LKGIKNLTVI
TNALNIALLL GVEPGIEVIM TGGEFKPPTL SLTGQKAADF FNGLNVHKLF LATAGLSLKA
GLTYPSISDL VVKKAMINAA ETTYLVADST KIGKSSLASL GALSLIDYII TDAGIQEKYK
NLLNENEIEL IIAD