Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2779 |
Symbol | |
ID | 8253887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3281812 |
End bp | 3282948 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644936425 |
Product | exported exo-alpha-sialidase |
Protein accession | YP_003093040 |
Protein GI | 255532668 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4692] Predicted neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAA GAAGCACAGG TATAATCGGT TTACTGATTT GTTTAACCGG AGGATATGGT TTAAAGGCAC AATCGCAAAA ATGGCGGTCA GGTATTATAA CAGACGAATT CTTATATGAG AAGGCAGCAT TTCCTTCCTG CCATTCTGCT ACCATAGCCG AAACGCCTAC CGGATTGGTG GCAGCCTATT TTGGTGGTAC CCATGAACGC CATCCGGATG TGGAGATCTA TGTGAGCAGG CAGGTTAACG GAACCTGGCT TGCTCCGGTT TCTGTAGCCA ATGGTATACA AAACGACAAA GTAAGGCTGC CTACCTGGAA CCCTGTATTG TACCAGGTAC CTGGTGGAGA ACTGTTGCTT TTTTACAAAA TTGGCCCTAA GCCATCCGAA TGGTGGGGCA TGATGCGCAG CTCAAAAGAT GGCGGCATTA CCTGGTCTGA AGCGCAGAAA TTACCGGAAG GCCAGATTGG CCCAGTAAAA AACAAACCGG TGCTGCTCAG CAATGGTAAC TTGTTCTGTC CTTCCAGTAC AGAAGGCAAA GGCTGGAAAG TCCATTTCGA AGTAACCAAA GACAATGGCA AAACCTGGCG CTTAATCGGC CCGCTGGAAG GTGGGGAGAT CAATGCTATA CAGCCAAGTA TCCTGGATCA TGGCAATGGA AAACTACAGA TCCTGGCCAG GAGCAGGAAC AGGGCAATTG TAGAATCCTG GTCGCAGGAC AACGGTGAAA CCTGGTCTGC TTTAGCAAAA ACGTCCCTGC CAAACAACAA TTCAGGCACC GATGCAGTAA CTATGAAAGA TGGCAGACAT GTATTGGTAT ACAACCATGT ACTGCCTCCC GGAGACCTGG CAAAAGGGGC CCGGACGCCA TTAAATGTAG CGATTTCCAA AGATGGTAAA AACTGGTCGG CAGCGTTGAT CCTTGAGGAT TCGCCCACCA GCCAGTATTC CTATCCTGCG GTAATCCAAA CCTCAGATGG TTTGCTGCAT TTCATTTATA CCTGGAGAAG GGAAAAGATC AAACATGTAG TAGTTGATCC ATCAAAACTT AAGCTTAAAA AGATAGTAAA TGGCATTTGG CCAAAATTAA AGGGCTATAC AGCCCCTGTG GTTACTGATG TTAAAAACGA GGAATAG
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Protein sequence | MLKRSTGIIG LLICLTGGYG LKAQSQKWRS GIITDEFLYE KAAFPSCHSA TIAETPTGLV AAYFGGTHER HPDVEIYVSR QVNGTWLAPV SVANGIQNDK VRLPTWNPVL YQVPGGELLL FYKIGPKPSE WWGMMRSSKD GGITWSEAQK LPEGQIGPVK NKPVLLSNGN LFCPSSTEGK GWKVHFEVTK DNGKTWRLIG PLEGGEINAI QPSILDHGNG KLQILARSRN RAIVESWSQD NGETWSALAK TSLPNNNSGT DAVTMKDGRH VLVYNHVLPP GDLAKGARTP LNVAISKDGK NWSAALILED SPTSQYSYPA VIQTSDGLLH FIYTWRREKI KHVVVDPSKL KLKKIVNGIW PKLKGYTAPV VTDVKNEE
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