Gene Phep_2736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2736 
Symbol 
ID8253844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3229927 
End bp3231180 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content39% 
IMG OID644936384 
Productbeta-lactamase 
Protein accessionYP_003092999 
Protein GI255532627 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.416885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA GACTTTTATT TTTATTATTT CTTCTTTGTT CTATTGCCGG AAAAGCACAA 
AGGAACTATT CAACAGTTCT TCAGTCTTAT CTGAACGCTC AAGAGAAAGT GCATGGATTT
GGAGGTGCTG TATTCATCAC AAAAAAAGGA AAGGTCGTAC TTGAAAAAGC ATTCGGGCAG
GCAAACAGGG AAGGGAACAT TCCCAATTCT ATCCAAACGA AATTCAGGAT AGGGTCGATC
ACCAAGCAAT TTACCGCTGC AGCAATTTTA CAGCTGCAGG AAACTGGCAA GCTGAATGTT
GGGGATAAGT TGAGCAAGTA TTTTTCAGAC TACCCCAAAG GTGATAGTGT TACGCTACAC
ATGCTGCTCA ATCATACATC GGGTATAAAG GATTTTATAA GTATTCCAAG GATTTCAAGC
TTTTCTACCC TTTCTGACCC AAGGGATTCT GTAATAGCTG CTGTTAAGAA AGAACCATAT
GATTTTTCAC CCGGAACAAA ATATAACTAC AGCAATTCTG GTTACTTCCT GTTGGGATGT
ATTATTGAAA AAGTGAGCGG TGAGCCTTAT AGCACGTATA TCCTGAACAA TCTCATAAAA
AAAGCCGGTC TTCTAAACAC CTCAGTGGAC AGATCGATGA ACATTCCATT CAGCGCAGGC
GCGATGGTCT CAACAGTTGA GGATCTATAT AAATGGAACA AATCACTTTT TGGCGGTAAG
GTCATCAGTC CGGCTATGTT TACAATGATG ACTACCCGTA ATTTAAACAG GTATGGATAT
GGATTGGTTG TTGATTCCTT GTACAATAGG AAACTAATAG GTCACAGCGG AGTTATTGCG
GAATTTTTAA GCTATGATTT TATTTTTCCT GATGAAGATA CTCATGTGAT CATTCTTTCT
AACAGTGATA CAAATCTGGC GGCAATTTCT TCTGCGATCA ATGCAATACT TTTCGATAAA
GAGGTGATCA ATCCTTACAA GCATGTAGAA TTGAAAGTCG ACGTTAAAAA CTTTGAAAGG
TTTCTCGGTA AATATCAGAC TGATATTGGT GTGTTTGAGC TGATCATAAA AGACAATAAA
TTATTTAGGC GCACAAAAGG AGGAGATATG GAGCTTAAAC CTGAGTCTGA AACTCAACTT
TTCTTTTCAG ATGGCAGCGA CAGGCAACTG AACTTTGTCT TAGATGGCCG GAATGTTATC
AAAGCACAGA TCATTCGTGA CGGCGTTGTG CAGGAAGTAA AGAAAATCAA TTAA
 
Protein sequence
MKTRLLFLLF LLCSIAGKAQ RNYSTVLQSY LNAQEKVHGF GGAVFITKKG KVVLEKAFGQ 
ANREGNIPNS IQTKFRIGSI TKQFTAAAIL QLQETGKLNV GDKLSKYFSD YPKGDSVTLH
MLLNHTSGIK DFISIPRISS FSTLSDPRDS VIAAVKKEPY DFSPGTKYNY SNSGYFLLGC
IIEKVSGEPY STYILNNLIK KAGLLNTSVD RSMNIPFSAG AMVSTVEDLY KWNKSLFGGK
VISPAMFTMM TTRNLNRYGY GLVVDSLYNR KLIGHSGVIA EFLSYDFIFP DEDTHVIILS
NSDTNLAAIS SAINAILFDK EVINPYKHVE LKVDVKNFER FLGKYQTDIG VFELIIKDNK
LFRRTKGGDM ELKPESETQL FFSDGSDRQL NFVLDGRNVI KAQIIRDGVV QEVKKIN