Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2736 |
Symbol | |
ID | 8253844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3229927 |
End bp | 3231180 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644936384 |
Product | beta-lactamase |
Protein accession | YP_003092999 |
Protein GI | 255532627 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.416885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA GACTTTTATT TTTATTATTT CTTCTTTGTT CTATTGCCGG AAAAGCACAA AGGAACTATT CAACAGTTCT TCAGTCTTAT CTGAACGCTC AAGAGAAAGT GCATGGATTT GGAGGTGCTG TATTCATCAC AAAAAAAGGA AAGGTCGTAC TTGAAAAAGC ATTCGGGCAG GCAAACAGGG AAGGGAACAT TCCCAATTCT ATCCAAACGA AATTCAGGAT AGGGTCGATC ACCAAGCAAT TTACCGCTGC AGCAATTTTA CAGCTGCAGG AAACTGGCAA GCTGAATGTT GGGGATAAGT TGAGCAAGTA TTTTTCAGAC TACCCCAAAG GTGATAGTGT TACGCTACAC ATGCTGCTCA ATCATACATC GGGTATAAAG GATTTTATAA GTATTCCAAG GATTTCAAGC TTTTCTACCC TTTCTGACCC AAGGGATTCT GTAATAGCTG CTGTTAAGAA AGAACCATAT GATTTTTCAC CCGGAACAAA ATATAACTAC AGCAATTCTG GTTACTTCCT GTTGGGATGT ATTATTGAAA AAGTGAGCGG TGAGCCTTAT AGCACGTATA TCCTGAACAA TCTCATAAAA AAAGCCGGTC TTCTAAACAC CTCAGTGGAC AGATCGATGA ACATTCCATT CAGCGCAGGC GCGATGGTCT CAACAGTTGA GGATCTATAT AAATGGAACA AATCACTTTT TGGCGGTAAG GTCATCAGTC CGGCTATGTT TACAATGATG ACTACCCGTA ATTTAAACAG GTATGGATAT GGATTGGTTG TTGATTCCTT GTACAATAGG AAACTAATAG GTCACAGCGG AGTTATTGCG GAATTTTTAA GCTATGATTT TATTTTTCCT GATGAAGATA CTCATGTGAT CATTCTTTCT AACAGTGATA CAAATCTGGC GGCAATTTCT TCTGCGATCA ATGCAATACT TTTCGATAAA GAGGTGATCA ATCCTTACAA GCATGTAGAA TTGAAAGTCG ACGTTAAAAA CTTTGAAAGG TTTCTCGGTA AATATCAGAC TGATATTGGT GTGTTTGAGC TGATCATAAA AGACAATAAA TTATTTAGGC GCACAAAAGG AGGAGATATG GAGCTTAAAC CTGAGTCTGA AACTCAACTT TTCTTTTCAG ATGGCAGCGA CAGGCAACTG AACTTTGTCT TAGATGGCCG GAATGTTATC AAAGCACAGA TCATTCGTGA CGGCGTTGTG CAGGAAGTAA AGAAAATCAA TTAA
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Protein sequence | MKTRLLFLLF LLCSIAGKAQ RNYSTVLQSY LNAQEKVHGF GGAVFITKKG KVVLEKAFGQ ANREGNIPNS IQTKFRIGSI TKQFTAAAIL QLQETGKLNV GDKLSKYFSD YPKGDSVTLH MLLNHTSGIK DFISIPRISS FSTLSDPRDS VIAAVKKEPY DFSPGTKYNY SNSGYFLLGC IIEKVSGEPY STYILNNLIK KAGLLNTSVD RSMNIPFSAG AMVSTVEDLY KWNKSLFGGK VISPAMFTMM TTRNLNRYGY GLVVDSLYNR KLIGHSGVIA EFLSYDFIFP DEDTHVIILS NSDTNLAAIS SAINAILFDK EVINPYKHVE LKVDVKNFER FLGKYQTDIG VFELIIKDNK LFRRTKGGDM ELKPESETQL FFSDGSDRQL NFVLDGRNVI KAQIIRDGVV QEVKKIN
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