| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2725 |
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| Symbol | |
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| ID | 8253833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3214372 |
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| End bp | 3214950 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936373 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003092988 |
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| Protein GI | 255532616 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.964229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTATC AACAGTTTAC CGATGAAGAA TTGGCTGGTC TCCTGAAAAG TGGAGATCAT
GGGGCATTTA CTGTTATTTT CGACCGGTTT TTCGGGCTTC TTTTTGTTCA TGCCTGCAAA
ACAATTGCCG ATGAGGAAGA GGCCAAAGAT ATTGTTCAGG AGCTTTTTGA AACCTTATGG
ATCCGTCGTG AAACCATAGC TTTTGAACAT AGCTTATCGG CTTATTTATA TGCGGCCATC
AGAAACAAAA TCATCAACCG GATAGCCCAC AGACAGGTTG AAGACAAATA CATCAGTTCG
CTGCGCGACT TTATTGACCG GGACAACTAC CTGGCCGATT ACAGGCTAAG GGAAAAAGAG
ATGAAAAGGA TTGTTGAGCA GGAAATCTCT TCTTTACCCA CCAAAATGAA AGAGATTTTT
GAACTGAGCA GGAGAGATTA CCTTTCTTAT AAACAAATAG CAGTTAAACT CCAGATTTCC
GAACACACGG TTCGTACCCA TGTTAAAAAG GCACTCAGAA TCCTTAAACC CAAACTAAGC
CTGATTACCT ATCTGTTTTT TATTCATTAT TTGTTTTAA
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| Protein sequence | MPYQQFTDEE LAGLLKSGDH GAFTVIFDRF FGLLFVHACK TIADEEEAKD IVQELFETLW
IRRETIAFEH SLSAYLYAAI RNKIINRIAH RQVEDKYISS LRDFIDRDNY LADYRLREKE
MKRIVEQEIS SLPTKMKEIF ELSRRDYLSY KQIAVKLQIS EHTVRTHVKK ALRILKPKLS
LITYLFFIHY LF
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